KEGG   Eutypa lata: UCREL1_1799
Entry
UCREL1_1799       CDS       T03103                                 
Name
(GenBank) putative dna repair helicase rad25 protein
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
ela  Eutypa lata
Pathway
ela03022  Basal transcription factors
ela03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ela00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    UCREL1_1799
  09124 Replication and repair
   03420 Nucleotide excision repair
    UCREL1_1799
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ela03021]
    UCREL1_1799
   03400 DNA repair and recombination proteins [BR:ela03400]
    UCREL1_1799
Enzymes [BR:ela01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     UCREL1_1799
Transcription machinery [BR:ela03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     UCREL1_1799
DNA repair and recombination proteins [BR:ela03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     UCREL1_1799
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD
Other DBs
NCBI-ProteinID: EMR71163
UniProt: M7T2V0
Position
Unknown
AA seq 829 aa
MPPKRKASGNVAGAAKSGKASAASTPGPATPRDIDSDDNPGSPKDPAEIEEELQKAVDRF
SLAAYQDKTIRGPIDNASRYFGDNGKRDFSYLPLKPDHKSRPIWIDPLRGRIILENFSAL
AEQAKDFLITIAEPLSRPTFLHEYALTTHSLYAAVSVGLQPQDVVNTLERFSKTPLPESI
MLFIRNCASAYGKVKLVIKENKYFIESSDPEVLQKLLKDEIIGPCRVHGTDTVTSAPSMG
NLVIPGTSNAAGVQQAQIQQGEKPQGENGETNQAENPYDALREDDDDDNQEAVHSFEILD
KSVEIVQKRCLEIQFPMLEEYDFRNDDRNANLEIDLRPATQIRSYQEKSLSKMFGNGRAK
SGIIVLPCGAGKTLVGITAACTIKKGAVVLCTSTMSAHQWRQEFLKWCNIRPEDIAVFTA
DSKQRFPGNTGIIVTTYPMVTQSGKRAHDSQKMMDFLTQREWGLMLLDEVHVVPANIFRK
VSHSIKSHAKLGLTATLLREDDKIQDLNFLIGPKLYEANWMELSEQGHIAKVQCAEVWCP
MTTEFYDEYLRASDRGLKQNLYVMNPRKIQACQFLIDYHERRGDKIIVFSDNVYALEHVA
KALSKAYICGSTSNNERMHILENFMHNPNVKTVFLSKIGDTSLDLPEATCLIQISSHYGS
RRQEAQRLGRILRAKRRSDEGFNAFFYSLVSKDTAEMYYSTKRQAFLVDQGYSFKVITQL
AGMDKMDGLVFSTPQERRELLQKLVVDTEAKRTLDTEDVTDDLFWSGGRKRKGVRRTAGM
LGELSGGQDMAYIEQRKSANKALKKKAGPSSVFFKKIAREKERQRTTQR
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgcctcccaagaggaaagcgtcagggaatgtcgccggtgctgccaagtcgggaaaggct
tccgcagcttcgacacctgggcctgctacacctcgagatatcgatagcgacgacaatcca
ggatcgcctaaagacccagccgagattgaagaagagttgcagaaggccgtagaccgattc
tctcttgctgcctaccaagacaagaccatccgtggtcctatcgacaatgcctcgcgatac
ttcggcgacaatgggaagcgagatttctcctacttgcctttaaaaccagaccacaaaagt
cgaccgatttggatcgatcctctacgagggagaattatcctggaaaacttcagtgctctt
gccgagcaagcaaaggatttcctcattaccatcgcggagcctttgtctcgtccgacattt
ctacacgaatatgccttaacgacccacagtctttatgctgctgtatccgtcggcttgcag
cctcaggatgtcgtcaatactctcgagcgcttctctaagacgcccctgcctgagtcgatc
atgctttttattcgcaactgcgcttctgcttacggaaaagtcaagctcgtcatcaaagaa
aacaagtatttcatcgagagtagcgatcccgaagtcctacaaaaacttctgaaagacgag
atcattggtccatgccgcgttcacggcaccgacacagtaacaagcgcaccatccatgggt
aaccttgtcatccccggaacttccaatgctgcaggcgtccaacaggcccagattcagcag
ggcgaaaagccgcaaggagaaaatggcgagacaaaccaggcagagaatccctacgatgcg
ctaagggaagatgatgacgacgataatcaagaggccgtccattctttcgagatcctcgat
aaaagcgttgaaatcgtacagaagcgctgtcttgaaatccaatttcctatgcttgaggag
tacgatttccgtaacgatgacagaaacgcgaacctcgagatcgacctgcgaccggcaact
cagattagaagttatcaggaaaagagtttgagtaagatgttcggtaacggacgagcgaag
agtggtattatcgtattgccatgtggtgccggcaagacattagtgggtatcacggctgcg
tgtacgattaaaaaaggagcagtcgtcctctgcacgagtaccatgtctgcacatcaatgg
cgtcaagaattcttaaaatggtgtaatattagacccgaggatattgctgtcttcacggca
gatagcaagcagaggttccctggcaatactggtatcatcgtaactacttatcccatggtt
acacaatctggcaagcgggcgcacgactcccagaagatgatggactttcttacacaacgt
gagtggggtctaatgctactcgacgaggttcacgttgtccctgccaatatcttccgaaag
gtctcacactccatcaaaagccacgcgaagctcggactgacggcaacattacttcgagag
gatgacaagattcaggacttgaactttttgattggacccaagttgtacgaagccaactgg
atggagctttcagagcaaggtcacatagccaaagttcaatgtgcagaagtttggtgccca
atgacgaccgagttctacgatgaatatttgcgggcgtcagatcgaggtctcaagcaaaac
ctctacgttatgaatccccgcaagatacaagcttgccaattccttatagattatcatgag
aggcgcggagacaagattatcgtattctccgacaatgtctacgctctggaacacgtcgca
aaggctctaagcaaggcatacatttgtggctcaactagcaataacgagcgcatgcatatc
ctcgagaacttcatgcacaaccctaacgttaagactgtttttctttccaagattggggac
acgtctctcgatcttccagaagctacctgcctaattcagatatcgtcacactacggatcc
cgtcgtcaggaggcacagcgtctgggccgcattctccgagccaagcggagatcagatgaa
gggttcaatgctttcttctactccctagtttctaaagacacagctgagatgtattattcg
accaagcgacaagcattcctcgtagaccaaggctattcgttcaaggtcattacacagctt
gctggcatggacaagatggatggtctagtctttagtactcctcaggaacggcgggagctc
ttacagaagcttgtagttgatacagaggctaagagaacgcttgacacggaagatgtcaca
gatgacctcttctggtccggaggcaggaaaaggaaaggcgtccgcagaacagcgggcatg
ctcggagagctcagtggcggtcaagacatggcgtacattgaacagcggaagagcgccaat
aaggcgcttaagaagaaggcaggacctagcagtgtctttttcaagaaaattgcccgggag
aaagagaggcagagaacaacacagcggtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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