KEGG   Escherichia coli clone D i2: i02_2340
Entry
i02_2340          CDS       T02004                                 
Symbol
sbcB
Name
(GenBank) exonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
eld  Escherichia coli clone D i2
Pathway
eld03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:eld00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    i02_2340 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eld03400]
    i02_2340 (sbcB)
Enzymes [BR:eld01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     i02_2340 (sbcB)
DNA repair and recombination proteins [BR:eld03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     i02_2340 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     i02_2340 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      i02_2340 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AER84900
Position
2310771..2312246
AA seq 491 aa
MIFDTLADSRNNGFNLMMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIG
EPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGYNN
VRFDDEVTRNVFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSF
RLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVP
QMKPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLY
TAKADLGDNAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKILRENPQVR
EKVVAIFAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIE
KLLFNYRARNFPGTLDYAEQQRWLEHRRQVFTPEFLQGYADELQMLAQQYADDKEKVALL
KALWQYAEEIV
NT seq 1476 nt   +upstreamnt  +downstreamnt
gtgatatttgatactctggcagacagcagaaacaacggatttaacctaatgatgaatgac
ggtaagcaacaatctacctttttgtttcacgattacgaaacctttggcacgcaccccgcg
ttagatcgccctgcacagttcgcagccattcgcaccgatagcgaattcaatgtcatcggc
gaacccgaagtcttttactgcaagcccgcggatgactatttaccccagcctggagcagta
ttaattaccggtattaccccgcaggaagctcgggcgaaaggagaaaacgaagccgcattt
gccgcccgtattcactcgctttttaccgtaccgaagacctgtattctgggctacaacaat
gtgcgtttcgacgacgaagtcacacgcaacgttttttatcgtaatttctacgatccttac
gcctggagctggcagcatgataactcgcgctgggatttactggatgttatgcgtgcctgt
tatgccctgcgcccggaaggaataaactggcctgaaaatgatgacggtctaccgagcttt
cgccttgagcatttaaccaaagcgaatggtattgaacatagcaacgcccacgatgcgatg
gctgatgtgtacgccactattgcgatggcgaaactggtaaaaacgcgtcagccacgcctg
tttgattatctctttacccatcgtaataaacacaaactgatggcgttgattgatgttccg
cagatgaaacccctggttcacgtttccggaatgtttggggcatggcgcggcaataccagc
tgggtggcaccgctggcgtggcatcctgaaaatcgcaatgccgtaattatggtggatttg
gcaggagacatttcgccattactggagctggatagcgacacattgcgcgagcgtttatat
accgcaaaagccgatcttggcgataacgccgccgttccggttaagctggtgcatatcaat
aaatgtccggtactggcccaggcgaatacgctacgcccggaagatgccgaccgactggga
attaatcgtcagcattgcctcgataacctaaaaattctgcgtgaaaatccgcaagtgcgt
gaaaaagtggtggcgatattcgcggaagccgaaccgtttacgccttcagagaacgtggat
gcacagctttataatggctttttcagtgacgccgatcgtgcagcaatgaaaattgtgctg
gaaaccgagccgcgtaatttaccggcactggatatcacttttgttgataaacgaattgaa
aaactgttgttcaattatcgagcgcgcaacttcccggggacgctggattatgccgagcag
caacgctggctggagcaccgccgccaggtcttcacgccagagtttttgcagggctacgct
gatgaattgcagatgctggcacaacagtatgccgatgacaaagagaaagtggcgctgtta
aaagcgctttggcagtacgcggaagagatcgtctga

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