KEGG   Escherichia coli LF82: LF82_2046
Entry
LF82_2046         CDS       T00854                                 
Symbol
rumA
Name
(GenBank) 23S rRNA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
elf  Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:elf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:elf03009]
    LF82_2046 (rumA)
Enzymes [BR:elf01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     LF82_2046 (rumA)
Ribosome biogenesis [BR:elf03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LF82_2046 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Methyltransf_25 PCMT RrnaAD Met_10 Methyltransf_11 MTS Cons_hypoth95 Methyltransf_15 Methyltransf_23 Methyltr_RsmB-F Methyltransf_4 FtsJ Ubie_methyltran PrmA MetW Methyltrans_SAM Methyltransf_32
Other DBs
NCBI-ProteinID: CAP77218
Position
complement(2891909..2893210)
AA seq 433 aa
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQ
YARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVI
ADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACL
GSLQSMRHLGHVELVQATSGTLMILRHTAPLSSADREKLECFSHSEGLDLYLAPDSEILE
TVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVEPEDRVLDLFCGMGNF
TLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKV
LLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHT
GHLESMVLFSRVK
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggcgcaattctactctgcaaaacgacgcacgacgacgcgtcagatcataaccgtttca
gtcaacgacctcgactcttttggtcagggtgtggcgcgacataacggcaaaacattattt
atccccggattattgccgcaggaaaacgcggaagttactgttactgaagataaaaaacag
tatgcccgcgctaaagtcgtacgtcggttaagcgatagcccggaacgcgaaacgccacgc
tgtcctcattttggcgtatgcggcggctgtcagcaacaacacgccagtgtggatttacag
cagcgaagcaaaagtgcggcactcgcccgattaatgaaacacgaagtctctgaagtgatc
gccgatgttccctggggctatcgccgtcgcgcgcgtttaagtctgaactacttaccgaaa
acacagcaacttcagatggggtttcgcaaagcgggctccagtgacattgtcgacgtgaaa
caatgccccattttagtgccccaacttgaagcattgctgcccaaagtcagggcatgcctg
ggcagcttacaatctatgcgccatcttggtcatgttgaactggtacaggcaaccagcggc
acgctaatgattttgcgccataccgcaccgctaagttcggcagatcgcgaaaaactggaa
tgcttttcgcattctgaaggcctggatctgtatctcgcccccgatagtgagatactcgaa
accgtctctggtgagatgccctggtatgactcaaatgggttgcgcttaacttttagcccg
cgcgattttattcaggtcaatgcgggtgtgaaccagaaaatggtagcgcgtgcgttggaa
tggctggatgtggaacctgaagatcgcgtactggatctgttctgcggtatgggcaacttt
acactgccattggcgacacaagctgccagtgtggtgggtgtagaaggtgttccggcgctg
gtggaaaaaggccagcagaatgcgcgtcttaatggcttacagaatgtgacgttttatcac
gaaaatcttgaagaagatgtcacaaagcagccgtgggcgaaaaacggcttcgataaagtg
ttgttggacccggcgcgagcaggtgccgcaggtgttatgcagcaaattataaaactggaa
cctattcgtatagtttatgtatcctgtaaccctgcaacgctggctcgggatagcgaagcg
ttattaaaagcaggatataccattgcgcgactggcgatgctggatatgttcccacacacg
ggacatctggaatcgatggtacttttctcgcgcgttaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (28)   

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