KEGG   Eubacterium callanderi: ELI_0009
Entry
ELI_0009          CDS       T01336                                 
Name
(GenBank) hypothetical protein
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
elm  Eubacterium callanderi
Brite
KEGG Orthology (KO) [BR:elm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:elm03032]
    ELI_0009
   03400 DNA repair and recombination proteins [BR:elm03400]
    ELI_0009
Enzymes [BR:elm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     ELI_0009
DNA replication proteins [BR:elm03032]
 Prokaryotic type
  DNA Topoisomerases
   ELI_0009
DNA repair and recombination proteins [BR:elm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ELI_0009
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 UFD1 TOPRIM_C
Other DBs
NCBI-ProteinID: ADO35034
UniProt: E3GHQ5
Position
5241..7163
AA seq 640 aa
MSDNLKNEKNDYTADQIQVLEGLEAVQKRPGMYIGSTGKQGLHHLVYEVVDNSIDEALAG
YCKNIVVTIDKNNGITVVDDGRGIPTDMNHKMKKTGVELALTVLHAGGKFGGGGYKVSGG
LHGVGVSVVNALSSELTVEVKQNKKIYHQTFAKGKKTSELEVTGNTNRTGTTVHFQPDPD
IFDELVYDFDVLEHRLRELAFLNKGVSITLADEREAEKRKETYCYEGGIRSYIEYMNKNK
DPLYEQIAYYEKEMDDYSLEIAFQYTAGYSENIYSYANNIYTPEGGSHLNGFKSALTRTI
NTYARKNNYIKGNDKNLTGEDVREGLTAIISIKLLDPQFEGQTKTKLGNPEVKGIVETIV
GDELSAFLEENPTIAKTVIEKTLSASRAREAAKKARELTRRKSALDTTALPGKLADCREK
DPSMSEIFIVEGDSAGGSAKSGRDSRIQAILPLRGKILNVEKSRLDRILTADTLKSMITA
FGTGVGEDFNVEKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRGLIEEGYVYIAQPPL
FKVARGQHVEYVYNEKALDKMFEDKDRSKYTIQRYKGLGEMDAHQLWETTMDPSVRILNR
VNIEDAAYADEVFTILMGDKVQPRKEFIERNAAKVKNLDI
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgtcagacaatttaaaaaatgagaaaaatgattatactgccgaccagatacaggtgctg
gaaggccttgaggcggtccagaagagacctgggatgtatatcgggagcaccggcaagcag
gggctccaccatcttgtctatgaagtcgtggataactccatcgatgaggcgctggcgggt
tactgtaagaatattgtggtcaccattgataaaaataacggtatcaccgttgtggatgac
ggccgtggtattccgaccgatatgaaccacaaaatgaaaaagaccggggttgagctggca
ctgacggttctgcacgccggcggtaaatttggcggtggagggtacaaggtatccggcggc
cttcatggcgttggggtttccgttgtcaacgccctctcctctgaactgactgttgaggtc
aagcagaataaaaagatttaccaccagacctttgccaagggtaaaaagacctctgagctt
gaagtgactggcaacaccaaccggacgggtaccactgtccatttccagcccgatccggat
atttttgacgagctggtgtatgactttgatgttctggaacaccgtctcagagagctggca
tttttgaacaaaggcgtttccatcaccctggccgatgagcgagaagctgaaaagcgcaag
gaaacctactgctacgaaggcggtatccgttcttacattgaatacatgaacaagaataag
gaccctctttatgaacagatcgcatattatgaaaaggaaatggatgattacagtctggaa
atcgcttttcaatacacagcgggctattccgaaaatatctattcctatgccaacaatatc
tatacacccgagggcgggagccatttaaacgggtttaagagcgctctgacccgtaccatc
aacacctatgccagaaagaataattacatcaagggaaatgacaaaaacctgactggtgag
gatgtgcgtgaaggcctgacagccattatcagtattaagctgctggatccgcagtttgag
ggccagacaaaaacaaagcttgggaatcctgaggtcaagggaattgttgaaactattgtc
ggcgatgagctttcagctttcctggaagaaaacccgaccattgccaaaaccgttatcgaa
aaaacactgagcgcttccagagcccgtgaggcagccaaaaaagcccgtgagctcaccaga
cgtaaaagcgctctggacaccacagcgctgccgggcaagctggcggactgccgcgaaaag
gacccgtccatgtctgagatctttattgtggaaggggactccgcgggcggctcggccaag
tctggtcgagactccagaatccaggcgattctgccgctgcgtggtaagatcctgaacgtt
gagaaatcccgtcttgaccgtatcctgacagcggatacgctgaaatccatgatcactgcc
tttggcacaggggtcggcgaggactttaatgttgaaaaagcccgctaccacaagatcatt
atcatgacagatgccgacgttgacggcgcccatatccgtacgctgcttttaacctttttc
taccgctatatgcgcggcctgatcgaggagggctatgtgtacattgcccagccgccgctt
ttcaaggtagccagggggcagcatgtcgagtatgtctacaatgaaaaggcccttgacaaa
atgttcgaggacaaagaccgcagcaagtacaccatccagcgttacaaaggtcttggggaa
atggacgcccatcagctgtgggaaaccaccatggacccctctgtccgtatcctgaaccgc
gtcaacattgaggacgccgcctatgccgacgaggtattcaccattctcatgggcgacaag
gtacagccgagaaaagaatttattgaacgcaacgcggctaaggttaagaatctggatata
tga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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