KEGG T01336: ELI

Eubacterium limosum: ELI_1159

Entry

ELI_1159 CDS T01336

Definition

hypothetical protein

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

elm Eubacterium limosum

Pathway

elm03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:elm03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 HHH_5 Viral_helicase1 HHH_2 AAA_23 UvrD_C Helicase_RecD HHH PhoH PIF1 DUF2075 T2SE AAA_12 AAA_22 AAA_28 DUF258 NTPase_1 HHH_3 AAA_29 DEAD UvrD-helicase AAA_17 TrwB_AAD_bind AAA_10 AAA RNA_pol_A_CTD

Other DBs

NCBI-GI:

310826753

NCBI-GeneID:

9883058

UniProt:

E3GJY5

Position

1108602..1110812

AA seq 736 aa
METLKGTVDHIIFHNDKNGYTVADFDVDGQMVTVVGNFEELKEGEFLKLTGFWKEHQSYG
EQFQIESYALDLPTSEEGIIRYLSSGLLPGIGEKTAIEIVNHFGADTLDILDNHPDRLSE
VHGIGKKTLDKIKEVYSEQKEIRDVMIQIQEYGISSTYAMKLYKTYQSDTVRVLLDNPYQ
IIKDVRGIGFKIADQISAQLGFESQNPKRILSGISFCLQDCYSRGNTYMTEKDLIEHSAS
ILGVSREDIEFQLQELALRGDVRLEFIDDEPAYYPSALFEAEDNAALSMVRLAGAVFEMQ
EVDIPAMIAAYEEDMSIRLDNRQAEAIEAAIENGIAIITGGPGTGKTTIINGIVYIFKRL
GMKTVLAAPTGRAAKRITETTGEQAKTIHRLLEYDYSGDDDFPSFNRDEENPLEADAIIL
DEASMIDIVLLNSLLEAIRPGTRLILVGDADQLPSVGPGNVLQDLIESNVVKVVRLDRIY
RQSEESMISINAHAINEGMMPEINNQSDFMFIRTMDPDKVLDTILDLVAWRIPEKKGFDA
MKDVQVISPIKKGKLGVISLNKELQEVLNPAADYKKEKTFGTVVFREGDKVMQIKNNYKL
KWEDIHGFETGEGVYNGDIGNIIRIDEYNKTFEILLTDDKKVVYEFDQLDELTHAYAMTV
HKSQGSEFPVVIMPMVGGPPMFLNRKLLYTAVTRAKKMLMLIGPQNYFYRMVKSGDTNER
RTALKQRIKMYGELNV

NT seq 2211 nt +upstreamnt +downstreamnt
atggagaccttaaaaggaacagtagatcatattattttccataatgacaaaaacggttat
accgtagcggattttgatgtggacggccaaatggtaacggtcgttggcaattttgaggag
ctgaaggagggcgaatttttaaagctgaccggcttctggaaggagcaccagagctatggc
gagcagtttcagatcgagagctatgcgctggatctcccgacctctgaggaaggcatcatc
cgttatctgagttcaggactcctgccgggtattggcgaaaagaccgctattgagatcgta
aaccattttggagccgacacgctggatatcctggacaaccatccagaccggctgagcgag
gttcacggcatcggcaaaaagacactcgacaaaataaaagaggtttacagtgaacagaag
gaaatccgggatgtcatgatccagatccaggaatatggcatttcctcgacctatgccatg
aagctgtataaaacctatcagagtgatacggtgcgtgttcttttggataacccctaccaa
atcatcaaggatgtgcgcggcattggctttaaaatagcagaccagatttccgctcagctg
ggttttgagtcccagaaccctaagcggattctctcgggcatcagcttctgccttcaggac
tgttactcaaggggcaacacctacatgaccgaaaaagaccttattgagcacagcgccagt
atcctcggggtttcaagggaggacattgaatttcagcttcaggagctggccctgcgggga
gacgtacgcctagagttcatcgacgacgagccagcctactatccttcagccctttttgag
gcagaggacaatgccgccctgtccatggtacgcctggctggcgcagtctttgagatgcag
gaagttgatataccagccatgatcgcagcctatgaggaggatatgagcattcgtctggat
aaccggcaggcagaggccattgaggcggccatcgaaaatggcatcgccattattacaggg
ggaccaggcacagggaaaacaacgattatcaacggtatcgtctacatttttaagcgtctt
ggcatgaaaactgttctggctgcccccacaggccgcgccgccaagcgcatcacagaaaca
accggtgagcaagccaagaccatccaccggcttttggagtatgactattctggtgacgat
gattttccatcctttaacagggacgaggaaaacccgcttgaggctgacgccatcattctg
gatgaagcctctatgattgatattgtgctgctcaacagcctgctggaggccatcaggccc
ggcacgcgcctcattctggtaggcgacgccgaccagctgccctccgttggaccgggaaac
gtcttacaggacctgatcgagagcaacgtggtcaaggttgtgcgtctggaccgtatctac
cgtcagtcggaggaaagcatgatctccataaacgctcatgccattaatgagggtatgatg
ccggaaatcaataaccagtctgactttatgtttataaggacaatggaccccgataaggtg
ctggataccattttggatctggttgcctggcgtattcctgaaaaaaaaggctttgacgcc
atgaaggatgttcaggtcatctcacccattaaaaaaggaaagctcggcgttatttcgctg
aataaggagctccaggaggttctgaacccagcggcagactataaaaaggaaaagaccttt
ggtacagtggtgttccgcgagggggacaaggtcatgcagattaaaaacaattataagctc
aagtgggaggatatccacggctttgaaaccggagagggtgtttataacggcgatatcggc
aacatcatccgcattgatgagtacaataaaacctttgaaatcctgctgacagatgacaaa
aaagtcgtttatgagtttgaccagctcgacgagctcacccatgcctatgccatgactgtt
cacaaaagccaggggagtgaatttccagttgttatcatgccgatggtaggcggaccgcct
atgtttttaaaccggaagctgctgtacacagcagtgaccagagccaaaaagatgctgatg
cttatcgggcctcagaattatttttaccggatggtcaaatccggagataccaatgaacgg
cggacagccctcaaacagcggatcaaaatgtatggagagctcaatgtctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (30)   
   Pfam (30)   
All databases (39)   

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