KEGG   Escherichia coli O55 H7 RM12579 (EPEC): ECO55CA74_12170
Entry
ECO55CA74_12170   CDS       T02066                                 
Symbol
sbcB
Name
(GenBank) exonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
elr  Escherichia coli O55:H7 RM12579 (EPEC)
Pathway
elr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:elr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    ECO55CA74_12170 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:elr03400]
    ECO55CA74_12170 (sbcB)
Enzymes [BR:elr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     ECO55CA74_12170 (sbcB)
DNA repair and recombination proteins [BR:elr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     ECO55CA74_12170 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     ECO55CA74_12170 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ECO55CA74_12170 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AEZ41016
Position
2493951..2495375
AA seq 474 aa
MNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDDEFNVIGEPEVFYCKPADDYLPQP
GAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNVFYRNFY
DPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHSNAH
DAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSGMFGAWRG
NTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNAAVPVKLV
HINKCPVLAQANTLRPEDADRLGINRQHCLDNLKILRENPQVREKVVAIFAEAEPFTPSD
NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLDY
AEQQRWLEHRRQVFTPEFLQGYAEEIQMLAQQYADDKEKVALLKALWQYAEEIV
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgaatgacggtaagcaacaatctacctttttgtttcacgattacgaaacctttggcacg
caccccgcgttagatcgccctgcacagttcgcagccattcgcaccgatgacgaattcaat
gtcatcggcgaacccgaagtcttttactgcaagcccgcggatgactatttaccccagcct
ggagcagtattaattaccggtattaccccgcaggaagctcgggcgaaaggagaaaacgaa
gccgcatttgccgcccgtattcactcgctttttaccgtaccgaagacctgtattctgggc
tacaacaatgtgcgtttcgacgacgaagtcacacgcaacgttttttatcgtaatttctac
gatccttacgcctggagctggcagcatgataactcgcgctgggatttactggatgttatg
cgtgcctgctatgccctgcgcccggaaggaataaactggcctgaaaatgatgacggtcta
ccgagctttcgccttgagcatttaaccaaagcgaatggtattgaacatagcaacgcccac
gatgcgatggctgatgtgtacgccactattgcgatggcgaaactggtaaaaacgcgtcaa
ccacgcctgtttgattatctctttacccatcgtaataaacacaaactgatggcgttgatt
gatgttccgcagatgaaacccctggttcacgtttccggaatgtttggggcatggcgcggc
aataccagctgggtggcaccgctggcgtggcatcctgaaaatcgcaatgccgtaattatg
gtggatttggcaggagatatttcgccattactggaactggatagcgacacattgcgcgag
cgtttatataccgcaaaaaccgatcttggcgataacgccgccgttccggttaaactggtg
catatcaataaatgtccggtgctggcccaggcgaatacgctacgcccggaagatgccgac
cgactgggaattaatcgtcagcattgcctcgataacctgaaaattctgcgtgaaaatccg
caagtgcgtgaaaaagtggtggcgatattcgcggaagccgaaccgtttacgccttcagat
aacgtggatgcacagctttataatggctttttcagtgacgccgatcgtgcagcaatgaaa
attgtgcttgaaaccgagccgcgtaatttaccggcactggatatcacttttgttgataaa
cggattgaaaagctgttgttcaattatcgggcacgcaacttcccggggacgctggattat
gccgagcagcaacgctggctggagcaccgccgccaggtcttcacgccagagtttttacaa
ggctatgcagaagagattcagatgctggcgcagcagtatgccgacgataaagaaaaagtg
gcgctgttaaaagcgctttggcagtacgcggaagagattgtctaa

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