KEGG   Esox lucius (northern pike): 105007221
Entry
105007221         CDS       T04894                                 
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
els  Esox lucius (northern pike)
Pathway
els03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105007221 (nup98)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:els03019]
    105007221 (nup98)
   03036 Chromosome and associated proteins [BR:els03036]
    105007221 (nup98)
Messenger RNA biogenesis [BR:els03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     105007221 (nup98)
Chromosome and associated proteins [BR:els03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    105007221 (nup98)
SSDB
Motif
Pfam: Nup96 Nucleoporin2 Nup98_GLEBS Nucleoporin_FG
Other DBs
NCBI-GeneID: 105007221
NCBI-ProteinID: XP_010864364
UniProt: A0A3P8XIX9
Position
LG07:29040053..29085978
AA seq 1835 aa
MFNKSFGAPFGGGTGGFGTSSSFGQQNTGFGAATGGFGASAFGATNNSGGLFGATQNKPV
VTANPQQIHTGAGRGGGLFGSSTFSQPVTSSTSSSFGFGAASGTSTSLFGSTNTGGGGLF
SQQSNAFGAAKPASFGTFGTSTASSGGLFGATNTNSNPFGGASASLFGASGFTQQAAQPG
TTVKFNPPTGSDTMVKGGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNPM
AAPTGGLFGAATAATPSTGAAGLFGSSATNTGFSFGQAKTSFGTSSGGFGAATGSLFGQQ
QPQQAQPVAGLFKPFGQATTAPNTGFSFGHTSTMGQPQQTSAMGGLFGATAASQAGGLFG
NTAQTTPATGFGTGTGLFGQTNTAFGNVGTQQSLFGNKTAGFGATTTSAPSFGTGTGLFG
SKPALTLGTGTNTSNFGFGPTAAGGGLFGNKTAAGGLGTGLGAGFGAAVGTGPMSLFGNN
KTLTSNLGTMGAFGNQGFTTGTSTLGFGAPQQPVALTDPNAAAAQQAVLQQQINALAYSP
FGDSPLFRNPLSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPATRVRPKALTSSGSSK
SQLFDGLDDDEPSLTNGAFMPRKSIKKLVLKNLNGSSLYSSPINRDTDDLGSPPEYPLNG
LSASVDEDDDVREVVEAGIEDDLEINKFYTNPIAKPVPQPSLQDTISELNAHRVGHGGRN
GLEVSSEDISLGEDSIQEEREEVEQEAAPHPAGILLSRVGYYTIPAMDELAKMVDENGEC
VVENFTVGRRGYGSVFFHGEVNVTGLNLDEIVHFRRKEVIIYPDDKNKPPVGEGLNRRAE
VTLDGVWPNDKTTCTQIKSPERLSEMNYEGRLENASRKQGARFLEYRPETGSWVFEVAHF
SKYGLQDSDEDEEVPLKVDPKKLKTATAIPSGLQKLPPSQQQVAPQAQSTGVLELLSRVS
EVDSDMADITQDAPGDSLLEEEGESCVADEKGIRLGTVTPMEHNPVSASSQIASSLGINP
HTLQIMKASLFAEDDDGDMFQEQGGKKSYVSEASPRILLPGMQGRPSIGGLLQTRFSGAS
LFSQLPEVSFGGGLPGRLSVSRVAVPEPSRLSPWPSLGTSLLLPAPAAEATVRTVGARRL
GGPVASDHSVTLGKGRLLMDAALFMGQSFRVGWASGWTLVHCGDRLSGPGDKVQDQGDFG
AGGFGFLAKTAKSKPLSDSPFKVVIEKVVGLVPRDSEESQAVYQRPLEIGLKHSDISTKG
SCPFIQPQSGVAALHEYAEWITNLNQEAGAGDSVLGHWAQVWTLCEALWGQLSSTENEPG
TSGYLEQLQRRRSFSAWLSHSASQRIEQEVGLNKGGGHVEAIFSYLTGHRISDACRLAQK
SGDHRLALLLSQAAGSQFGRELLVLQLADWNRMQTDSFLQEERLRIFALLAGKPVWQSTD
CVVNVCSELDWKRCLAVHLWYMLPPTASIADALAKYEVAFQGTDEGQKYACAPLPPYLDQ
SEQLDMEEEDEDKRPLYDICFHLLKLYSDRHYSLQQLLDPLTVTHERLDYRLSWHLWSVL
QALHYTHLGLSRQGLIHTSYAAQLESAGLWDLAIFVLLHIPDDTLRERAVREMLHLHCPL
LETEESAKKERFLTERLLIPEQWLHQAKATRARREADRHREALHLYRAGHWNLCHRLVIQ
HLASDCIINDNHDYLLEFLEGLAVSERSALIQDWDMAGRVYLDYIRVIHTLQAIQQMDSA
GYELERLHTDVTSLCSRVELLPCSTAKDRLAQSEMAKRVANILRVVLSLQQGGEGGEIPL
SQLAPHIGRLPMPEDYALEELRSLTQSYLRQLIVS
NT seq 5508 nt   +upstreamnt  +downstreamnt
atgttcaacaagtcatttggtgctcccttcgggggagggacgggaggatttggcacttca
tctagttttggtcaacaaaacactggctttggggctgcaacaggtggtttcggggcctct
gcgtttggggcgaccaacaactctggaggactctttggggcaacacaaaataaaccagtg
gtgacagccaatcctcagcaaatccacactggtgcaggtagaggaggtggcctgtttggt
tccagtacgttcagccaacctgtgacatcgtctaccagtagcagctttgggtttggtgca
gccagcggcacgtccaccagcttgtttggcagcaccaacaccggtggtggtggactcttc
tcccagcagagcaatgcctttggagccgccaaaccagcttcttttggcacttttggcaca
agcactgccagcagtggggggctgttcggggcaaccaacacaaactccaacccctttgga
ggagcatctgcctccctgtttggtgcttcaggattcacccaacaggccgcccagccaggc
accaccgtaaagttcaatcctccgacaggaagtgacactatggtcaaagggggtgtaacc
acgagcatcaacaccaagcaccagtgcatcacggccatgaaggagtatgagaacaaatca
ctggaggaactgaggttggaggactaccaggcagggaggaagggacccagtaaccctatg
gctgcaccaactggtggtctgtttggggctgcaactgcagccacccctagtacaggggct
gcagggctgtttggatcttctgccaccaacacaggtttctcttttggccaggccaaaact
tcctttggcaccagttcaggtggctttggtgctgctacaggcagtctatttgggcagcag
caacctcagcaggcccagccggtagccggtctgtttaagccctttggccaggccacgact
gcccccaacacaggcttctcctttggccacaccagcaccatgggccagcctcaacaaacc
agtgccatgggaggtctgtttggtgccacagcagcatcccaggcaggtggtctgtttgga
aacacagcgcagaccacaccagctacaggctttgggacaggcaccggactgtttggacaa
accaacacggcttttggcaatgttggcacacagcagagcttgtttggtaataagaccgca
gggtttggtgcaaccaccaccagtgccccgtccttcggcaccggaactggcctttttggt
agcaaacctgccctgacccttggaactggcacgaacacatctaactttggttttggaccc
actgctgctgggggaggcctctttgggaacaagactgcagcaggaggtctaggaacaggg
ttaggagctggctttggagcagcagtgggtactgggccaatgtctctatttgggaataac
aagacactaacttcaaatctgggaacaatgggagcattcggaaaccagggattcaccaca
ggaaccagcactctgggctttggagcacctcaacaacctgttgcgctgacggacccaaac
gcggcggcggcccagcaggcagtgctgcagcagcagatcaatgctttggcctattctccc
ttcggagactcccccctcttcagaaaccccctgtctgatcccaaaaaaaaggaagagcga
cttaagcccaccaatccggcagcccagaaggctttgacgacacccactcactataagttg
acgccacggcctgcgacacgtgtgcgccccaaagctctgacctcatcaggctcctcaaag
tcccaactgtttgatggactggatgacgatgagccttctctaaccaacggagccttcatg
cccaggaagagcatcaagaaactggtgctgaagaacctgaacggcagcagcttgtacagc
agcccgatcaacagagacacagatgacctgggctctccaccagagtaccccctcaatgga
ctaagtgccagtgtggatgaggacgatgatgtgagggaagtggtggaggcgggtatagag
gatgacctggaaatcaacaagttctacactaatcccattgccaagcccgttccccagccc
agcctacaagacactatctcagagctgaacgcccatcgggtggggcatgggggtaggaac
ggcctggaggtgagtagcgaggatatatccctgggagaggactccatacaggaggagcga
gaggaggtggaacaggaggcggccccacaccctgctggtattcttctgagccgtgtgggc
tactacaccatccccgctatggacgagctggctaagatggtggatgagaatggagagtgt
gtggtggagaacttcaccgtgggccgaagaggttacggctcagtgtttttccatggtgag
gtgaacgtgacggggctgaacctggatgagattgttcacttcagacgtaaagaagtcatc
atctaccctgacgacaagaacaagccgcctgttggggaggggctgaacaggcgagcagag
gtgactctagatggggtgtggcctaacgataagaccacctgtactcaaataaaaagccct
gagcgcctgtctgagatgaactacgagggccgcttggagaacgcctcacgcaaacagggc
gcacgcttccttgagtaccgccctgagacgggctcctgggtgtttgaggtggcccatttc
tccaaatatggcctacaggactctgacgaggatgaggaggtccctttaaaagtggatccc
aagaagctaaagactgctacagcaattccttcgggtctgcagaagcttcctccttcccag
cagcaggtggcgccacaggctcagtccacgggcgtgctagagctgctgagtcgtgtgtca
gaggtggacagtgacatggcagacattacacaggacgctcctggggacagcttgctggag
gaggaaggggagagttgcgtcgcggatgagaaagggattcggctgggaactgtgactccg
atggagcacaaccctgtctcagcttccagtcaaatcgcctcctctctggggatcaaccct
cacacgttgcagataatgaaggcgtctttgtttgctgaggatgatgatggggacatgttc
caggagcagggaggaaagaaaagctatgtatctgaggcctcccctcgtatccttctgcct
ggcatgcaaggccgtccctccattggtgggctcctgcagactcgttttagtggtgcaagt
cttttctctcagctccctgaggtgtcctttggaggtggccttcccgggaggctctctgtg
tctcgggtggctgtgcctgaaccgtcacggctctccccgtggccctcgctgggaacctcc
ttgcttttgcccgccccagcggcggaggccactgtacggacggtgggggctcgacgcctg
ggtggccctgtggcctcagaccactctgtcacactgggcaagggccgtcttctaatggat
gcggctttgttcatgggccagtcgttccgggtgggctgggcttccggctggacacttgtc
cactgtggagacaggctgagtgggcctggggacaaggtgcaggaccagggagatttcgga
gctgggggctttggattcttggccaaaactgcgaagagcaaaccactgtccgacagtcca
ttcaaggtggtgattgagaaggtggttggcctggtgccgcgggacagtgaggagagccag
gcggtgtaccagcggcccctggagattggtctaaagcacagcgacatcagtaccaaaggg
tcctgccccttcattcagccccagagtggggtggcagccctgcacgagtatgcagagtgg
atcactaacctcaaccaagaggctggtgctggcgactctgttctgggtcactgggctcag
gtgtggactctttgtgaggccttgtgggggcagctgagctcaactgagaacgaacctggt
accagtggctacttggagcagctgcaaaggaggaggagcttctcagcctggctgtcccac
agcgcctcccagagaatcgagcaggaagtaggcctgaacaaggggggaggacacgtggag
gccatcttcagctacctgactggacaccgcattagtgacgcctgcaggctggcccaaaag
agtggggaccaccgccttgcgctgctgctgtcccaggctgcagggtctcagtttggccgg
gagcttctggtgcttcagcttgcggactggaaccggatgcagacagactcatttctgcaa
gaggagaggcttcgcatcttcgccctgttagcagggaaacctgtgtggcagtctacagac
tgtgtggttaatgtttgttcggagctggactggaaacgttgtctggctgtccacttgtgg
tacatgttacctccaaccgcctccatcgctgatgccctggccaagtatgaggttgccttt
cagggcactgatgaaggtcaaaagtacgcctgcgccccccttcccccttaccttgaccaa
tcagaacagctggacatggaagaggaggacgaagataaaaggccgctctacgacatctgc
tttcaccttctcaaactctacagtgaccggcattacagcctgcagcagttgttggatccc
ctgacagtgacacacgagcgtctggactaccgtctcagttggcacctgtggtcggtcctg
caggcactgcactacacacaccttggcctctcccgacagggccttatacacaccagctat
gctgcccagctggagagtgctggcctctgggacttggccatctttgtccttctgcacata
cctgacgacacgctaagagagcgtgcagtaagggagatgctgcatcttcattgccccctg
ctggagacagaagagtctgccaagaaggagcgcttcctcacggagagactactgattccg
gaacagtggctccaccaggccaaggctaccagagccagaagagaggctgacagacaccga
gaggcactgcacctgtatagagcaggccactggaacctctgccaccgtctggtcatacag
caccttgcttcagactgtatcattaatgacaaccatgactatctgttggagttcctggag
gggctggctgtttctgagcgcagtgctctaatccaggactgggacatggcaggcagagtc
tacctggattatataagagtcatacacaccctacaagccatacaacagatggacagtgct
ggttatgagctggagcgtctacacactgacgtgacgtcactctgtagcagggtagagctc
ctcccgtgttccaccgctaaggaccgccttgcccagtcagagatggcaaaacgtgtggct
aacattctgcgcgtggtgttgagtttgcagcagggtggtgagggtggcgagatacccctg
tcccagctagctccccacattggacgtctgcccatgcccgaagactatgcccttgaggag
cttcgcagtctcactcaatcttacttgaggcagctaattgtcagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (64)   
   KEGG ORTHOLOGY (1)   
   RefGene (60)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (82)   

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