KEGG   Esox lucius (northern pike): 105008341
Entry
105008341         CDS       T04894                                 
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
  KO
K12897  transformer-2 protein
Organism
els  Esox lucius (northern pike)
Pathway
els03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105008341 (tra2b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:els01009]
    105008341 (tra2b)
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:els03041]
    105008341 (tra2b)
Protein phosphatases and associated proteins [BR:els01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     105008341 (tra2b)
Spliceosome [BR:els03041]
 Common components
  Common spliceosomal components
   SR proteins
    105008341 (tra2b)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_3 FMP27-BLTP2_C
Other DBs
NCBI-GeneID: 105008341
NCBI-ProteinID: XP_028971902
Position
LG20:complement(2167363..2172087)
AA seq 288 aa
MSDNEKDYNGERESRSPSRSLSAHGSGKSVSRSPAHSPAHSKDDSHHSGSKSRSRSRSKS
GSRRSHRSSRRHYSRSRSRSHSRRRRSRSYSGEYRRRRSHSHSPMSNRRRHLGNRANPDP
NCCLGVFGLSLYTTERDLREVFSKYGPLTDVSIVYDQQSRRSRGFAFVYFDNREDAKEAK
ERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGPSGGPSARRSSRDYDRGYD
RGYDRGYDRYDERDYYRSYGRKRSPSPYYNRGAYRSRSRSRSYSPRRY
NT seq 867 nt   +upstreamnt  +downstreamnt
atgagcgataatgagaaagattacaacggcgagcgggagtcccgctccccatccaggagt
ctgagtgctcatgggtctgggaagtcggtcagccgctccccagcccattccccggcccac
tccaaggatgactcccatcactccggctccaagtcccgctctcgctccaggtccaagtct
gggtctcgtaggtcacatcggagctctcgcaggcactacagccgttctcgctcgcgctct
cactcccgccgccggcgctcccgttcctacagtggggagtaccggaggaggcggagccac
agccattcgcccatgtccaaccgccgccgtcaccttggcaacagggcgaaccctgacccc
aactgttgtcttggcgtgtttggtctgagcctgtacacgacggagagagatctgagagag
gtcttctctaagtatggccccctgactgatgtcagcatcgtttatgaccagcagtcacgg
cgatctcgtggcttcgccttcgtctacttcgataaccgagaggacgccaaagaagcgaag
gaacgtgccaatgggatggagctggatggcaggagaattagggtggatttctccatcacc
aagcggcctcacacccccacccctgggatatacatgggtcgccctacatatggcggcggc
ggtcctagtggaggcccgagtgctcggcggtcatcccgggactacgaccggggctacgac
cgaggatacgaccggggctacgatcgctatgatgaaagggactactatcgttcttacggc
aggaaaaggtctccatctccctactacaacagaggagcctacaggtctagatcgcggtct
agatcctactctccgcgtcgttattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (51)   

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