KEGG   Esox lucius (northern pike): 105016348
Entry
105016348         CDS       T04894                                 
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
els  Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:els00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:els03041]
    105016348 (cwc22)
Spliceosome [BR:els03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    105016348 (cwc22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    105016348 (cwc22)
SSDB
Motif
Pfam: MA3 MIF4G Cnd1
Other DBs
NCBI-GeneID: 105016348
NCBI-ProteinID: XP_010878412
Position
LG16:12152066..12232932
AA seq 1068 aa
MATETNENDLPVELSPNSKEEPARSSGMEQPWGTRSRSPSEERTEHLAQQKSNEGAPEGA
PEGAPEGAPEGADGAATSPRANAHGASSPASDEPVVLGHPGVASPGVASSRATRGSRAPS
SASLSQEEEASSGSDGDTSDEDSDEGVVRRMKSSVAQIVRGPDDQSVERGRSPSPDDRDD
DRRRSRSRSRSRSQERDRRYGRGGYDRSRDDDRDRNYDRYERRSSRDKETELRRRGRSLS
PSQKNPSAEEPPVKKKKEELDPILTRTGGAYIPPAKLRMMQAQITDKSSLAYQRMSWEAL
KKSINGLINKVNVSNIAMIIQELLQENIVRGRGLLARSTLQAQSASATFTHVYAAVVAII
NSKFPQIGELILKRLILNFRKGYRRNDKALCLTASKFVAHLVNQNVAHEVLCLEMLTLLL
ERPTDDSVEVSISFLKECGLKLTEVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAI
RKDGFKDHPIIPDGLDLVEEEDQFTHMLPLEDDYNQEDILNVFKMDPDFLVNEEKYKAIK
KEILDEGSSDSGEDAGGSDDDGDEDEEKEEEGGGDEAEKVTIFDQTEVNLVAFRRTIYLA
IQSSLDFEECAHKLIKMDFPDSQTKELCNMILDCCAQQRTYEKFFGLLAGRFCLLKKDYM
ESFEAIFVEQYETIHRLETNKLRNVARMFAHLLYTDSVPWSVLECIKVSEDTTTSSSRIF
VKILFQELCAYMGLPRLNERLKDVTLQPFFEGLFPRDNPRNTRFAINFFTSIGLGGLTDE
LREHLKNAPKIIMTQNQEVESSDTDSSSSSSDSSSDSDSSDSDSSDSSSDSDSTSSSSSD
SDSRHKKSKGRKKVEKGNKKDKASSRKTSSKQKSPLEERPNKSLRHENRRRDDSSSDEDE
AHRGRGRPGPEDRHKASHHPPTRQRPDRAGHKDKDPPHGRPDRETDYQDRDRQPEPRAHS
KDDGKHKAPPVDRTDRDRVRHRSPEKEKAPESRSGRDRDRGARSKSPERSSRKEKDVESS
RDSYRNGVERQAERADKENRENRHHSDRYREPRRNEERSRDSSPRRRR
NT seq 3207 nt   +upstreamnt  +downstreamnt
atggctacagagacaaacgagaatgatttgccagtggagctaagtcctaattcgaaagaa
gagcctgccaggagcagtggcatggagcagccctgggggactaggagcaggagcccatca
gaggagagaacagaacacctggcacagcagaagagcaatgagggggcaccggagggggca
ccagagggggcaccagagggggcaccggagggggcggatggcgcagcaaccagtcccaga
gccaatgcccacggcgcatcaagccctgcatcggatgagcctgtcgttcttggccatcct
ggagttgccagtcccggggtagccagctctagagccaccaggggtagcagggccccttcc
agtgccagtctcagccaggaggaagaggcttctagtggctctgatggtgacaccagtgat
gaagacagtgatgagggagtggtgcgcaggatgaaaagcagcgtggctcagatcgtgcgt
ggaccagatgaccagagtgttgaaagaggcaggagccccagccccgatgacagggacgat
gaccgcaggaggtcccgctccaggtctcggtccagaagtcaggagagggatcgccgttat
ggtagaggaggttacgacaggtcaagggacgatgatcgtgaccgaaactatgaccgttac
gagcgccggtcaagccgggacaaagagactgagttaagaaggagggggcggtcgttgtcc
ccatcccagaagaacccttctgcagaagagccacctgtgaagaagaagaaggaggaactg
gaccccatcctgaccaggactggtggagcctacatcccccctgccaagctacgcatgatg
caggctcagatcactgacaagagcagtctggcttatcaacgtatgagctgggaggccctg
aagaaatccatcaacggtctaatcaacaaggtgaacgtgtccaacattgccatgatcatt
caggaactgctgcaggagaacattgtcaggggcagaggtctcctggccaggtctactctg
caggcccagagtgcctcagccaccttcactcacgtctacgcagcggtggtagccatcatc
aactcaaagttcccccagataggagaactcatcctcaaaagactcatcctcaacttccgc
aagggctaccggaggaatgacaaggcgctttgtctcactgcgtctaagtttgtagctcac
ctggtcaatcagaatgtggcccatgaggtgttgtgtctggagatgttgactctgctctta
gagagacctacggacgacagcgttgaggtgtccatcagcttcctgaaggagtgtggtctg
aaactcaccgaggtttcccctcggggcatcaacgccattttcgagcggctgcgcaacatc
cttcatgagtctgagattgacaagcgtgtgcagtacatgatagaagtgatgtttgccatc
aggaaagacggattcaaggaccaccccattataccagacggtctggacttggtggaggag
gaagatcagttcacacacatgctgccgctagaagatgactacaaccaagaggatatcctc
aatgtctttaagatggatccagactttttggtaaatgaagagaagtacaaagcaataaaa
aaggagattttggatgagggcagcagtgactctggggaagatgcgggtggaagtgatgat
gatggagacgaagacgaagaaaaggaagaggaaggtggcggagatgaagcagagaaagtc
actatctttgaccagacggaagtcaacctggttgcatttcgccgcaccatctatcttgcc
atccagtcaagtttggacttcgaagagtgtgcacacaagttgatcaagatggattttcct
gacagccaaacgaaagagctgtgcaacatgattctggactgctgtgctcaacagaggacc
tacgagaagttctttggtcttttagcggggaggttttgtctgctgaagaaggattacatg
gagagttttgaagccatcttcgtggaacagtatgaaaccatccatcgcctggagactaat
aaacttcgaaacgttgccaggatgtttgcccatctcctgtacacagactctgtgccctgg
agtgtgctggaatgtattaaagtcagtgaggacaccactacgtcatccagtcgaatcttc
gtcaagatcttgttccaggagctatgtgcctacatgggccttcccaggctaaacgaaaga
ctcaaggatgtgacgctgcagcccttctttgagggcctctttcctcgggacaaccccaga
aacaccagatttgccattaatttcttcacctccattggcctgggaggacttaccgatgag
cttcgtgagcatctgaagaatgcccctaagatcatcatgactcagaaccaggaagtggag
tcatcggacacagattcgtcctcgtcctcttctgactcctcatccgacagtgacagcagt
gacagtgacagctctgattcgtccagtgactctgactccacatccagcagtagctcagac
tctgattcgaggcataagaagagcaagggcagaaagaaggttgaaaaaggcaacaagaag
gacaaggcatcttccagaaagacctcctccaagcagaaatcccctctggaggaacggccc
aataagagtctgaggcatgagaaccgtcgtcgtgacgacagcagcagcgacgaggacgag
gcgcatcgcggtagggggagacctgggcctgaggaccgtcacaaagcctctcaccaccca
cccacgcgccagagaccggaccgcgccgggcacaaagacaaggacccgcctcatggccgt
cccgacagagagaccgactaccaggaccgggacagacagcctgagccccgggctcacagc
aaggatgacgggaaacacaaagcccctccggtggaccgaaccgaccgcgatcgagtcaga
caccggagccctgagaaggagaaggcgccagagagtcgaagcggcagggacagagaccga
ggggcaaggtcaaagtcaccggagagaagcagccgcaaagagaaggacgtggagtcctcc
agggactcataccggaacggagtggagcggcaggcagaacgggccgacaaggagaacagg
gagaaccgacatcactccgacagatacagagaacccaggagaaatgaggaacgaagcagg
gatagctccccgcgtagacggagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (72)   

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