KEGG   Esox lucius (northern pike): 105019428
Entry
105019428         CDS       T04894                                 
Name
(RefSeq) integrin beta-1 isoform X1
  KO
K05719  integrin beta 1
Organism
els  Esox lucius (northern pike)
Pathway
els03271  Virion - Rotavirus
els04145  Phagosome
els04510  Focal adhesion
els04512  ECM-receptor interaction
els04514  Cell adhesion molecules
els04530  Tight junction
els04810  Regulation of actin cytoskeleton
els04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    105019428
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    105019428
   04514 Cell adhesion molecules
    105019428
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    105019428
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105019428
   04530 Tight junction
    105019428
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105019428
   04810 Regulation of actin cytoskeleton
    105019428
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:els04131]
    105019428
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:els04147]
    105019428
   04515 Cell adhesion molecules [BR:els04515]
    105019428
   04090 CD molecules [BR:els04090]
    105019428
Membrane trafficking [BR:els04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    105019428
Exosome [BR:els04147]
 Exosomal proteins
  Proteins found in most exosomes
   105019428
Cell adhesion molecules [BR:els04515]
 Integrins
  Integrin beta subunits
   105019428
CD molecules [BR:els04090]
 Proteins
  105019428
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt PSI_integrin I-EGF_1 EGF_2
Other DBs
NCBI-GeneID: 105019428
NCBI-ProteinID: XP_010883921
Position
LG21:17765665..17802003
AA seq 802 aa
MDLKLLLISLLFGIICYSSAQQEGNECIKANVKSCGECIQVGAKCGWCTDPEFLKQGEAT
STRCDELESLRKRGCGAAKVENPRGSQRVLKNTPVTNRNKGADKLKPEDITQIQPQKLTL
SLRSGEPQSFNLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTQLMLEMAKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGRKFNTLVGQQQI
SGNLDSPEGGFDAIMQVAVCGDDIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPDGVTITYQSRCKNGVIGEGEMGRKCSNISIG
DEVSFTISITTKQCPKMGKSETIKIKPLGFTEEVEIALNFICECDCHKDGIKNSEICHNG
NGTFECGACRCNEGRIGRQCECSTNEVTSEDLDKNCRKDNGTDICSNNGDCVCGTCECKK
RENPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRVCICDTNWTGSACDCSLGTTTCL
ASNKQICNGRGTCECGTCKCTDPKFQGPTCEICPTCPGVCTEHKECVQCRAFGTGEKKDT
CERDCSYFNLIMVKHRNELPQPGQAFPLMHCKERDADDCWFYYTYAVNNNTEKEVHVVEK
PDCPEGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQEN
PIYKSPINKFQNPNYGRKAAAL
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggacctgaaattacttctgatatctttgttgttcggaattatttgttacagcagtgct
caacaagaagggaatgagtgcatcaaggccaatgtcaagtcctgtggcgaatgtattcaa
gttggagctaaatgtggatggtgcacagacccagagtttctgaagcagggtgaggccact
tcaacccgctgtgatgagctagagtctctaaggaagagagggtgcggtgctgctaaggta
gaaaacccccggggaagccagagagttctgaagaacacccctgtgaccaaccgtaacaag
ggagcagacaaactcaaaccagaagacatcacacagatccagccccagaaactcaccctg
agcctcagatctggtgaaccccagtctttcaacctgaagttcaaacgagctgaggattac
cccattgacctttactacctgatggacttgtccttctccatgaaagacgatctggaaaat
gtaaagaacctgggaacacagttgatgttggagatggcaaagatcacgtccgacttccga
attggttttgggtcctttgttgagaagacagtgatgccttatatcagtaccaccccagcc
aagctgctgaatccctgtactggtgaccagaactgcaccagtcccttcagctataaaaac
gtcctgaagttgaccagcaatggaaggaagtttaacactctggtgggacaacagcagatc
tctggaaacctggactcgccagagggaggttttgatgcaatcatgcaagtggctgtctgt
ggtgatgacattggctggagaaatgtaactcgtctactggtgttctccactgatgccggc
ttccactttgctggagatgggaaactgggaggaattgttctgcctaatgatgggaaatgc
cacctggagaacaacatgtacacaatgagccactactatgactacccctcgatcgcccac
ctggttcagaaactaagtgacaacaacattcaaaccatctttgcagtcacagaggaattc
cagcctgtttacaaggagttaaagaatctcatccctaagtctgcggttggcacactctcc
gccaactccagcaatgttatcaacctcattatcgatgcctacaattctctttcctcagag
gtgattctggagaatagtaagctaccagatggagtgaccatcacataccaatcacgctgc
aagaacggagtgattggggagggagaaatgggtagaaaatgctccaacatctccattggg
gacgaggtatccttcaccattagcatcacgactaaacagtgtcccaagatgggcaaatca
gagaccatcaagatcaaacccctggggttcacagaggaggtggagattgctctgaacttc
atctgtgagtgtgactgtcacaaagatggaatcaaaaacagtgagatctgccacaacgga
aatggaacatttgaatgtggagcctgcaggtgtaatgagggccgtattggtagacagtgt
gaatgcagcaccaatgaggtgaccagtgaagacctggataagaactgccgtaaagacaac
ggtactgacatctgcagtaacaacggagactgtgtgtgtggaacctgtgagtgtaagaag
agagagaacccagaagaacgctacagcggaaagttctgcgagtgtgacaacttcaactgt
gaccgttccaataacaaactctgtggaggacatggtcgttgtgagtgcagagtgtgtatc
tgtgataccaactggacgggtagtgcctgtgattgttccctgggtaccaccacctgcctg
gcttccaacaaacagatatgtaacggtcgaggcacctgtgagtgtggcacctgcaaatgt
accgaccccaagttccagggccccacttgtgagatttgtcccacctgtccaggagtctgc
acagaacacaaggagtgtgttcaatgcagggcatttggtacaggggagaagaaggacacc
tgtgagagggactgtagctacttcaacctgattatggtgaagcacaggaacgagctccct
cagccgggacaggccttccccctgatgcactgcaaggaaagggacgcagacgactgctgg
ttctactacacctacgctgtgaacaacaacacagagaaggaggtgcatgtggtggaaaag
ccagactgccctgagggccctgacatcatccccatcgtggctggcgtggtggcgggcatc
gtgcttattggcctggccctgttgcttatctggaagctgctcatgattatccatgacagg
agggagttcgccaagtttgagaaggagaagatgaacgctaaatgggacacgcaagagaac
ccaatatacaagagccctattaataagttccagaatccaaactatggacgtaaagctgca
gctctttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (66)   

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