KEGG   Esox lucius (northern pike): 105022056
Entry
105022056         CDS       T04894                                 
Symbol
pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
  KO
K12572  PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
els  Esox lucius (northern pike)
Pathway
els03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105022056 (pan3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:els03019]
    105022056 (pan3)
Messenger RNA biogenesis [BR:els03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105022056 (pan3)
  mRNA degradation factors
   3'-5' decay
    Pan complex
     105022056 (pan3)
SSDB
Motif
Pfam: Pan3_PK zf-CCCH zf-CCCH_4 zf_CCCH_4 Torus zf-CCCH_2 Pkinase
Other DBs
NCBI-GeneID: 105022056
NCBI-ProteinID: XP_028971958
Position
LG21:6995209..7014184
AA seq 832 aa
MNSGLPASAAPLGGVGIPCVKVKFCRYYAKDKTCFYGDECQFLHEEPSMGSMSLHGGGSP
VPLSMAGGAVTAAGYPLSAQPPCPVGVPNVPKKNDSMGSASTTLEGQLLTIPGMEGGALS
DANLTNSYFSSSFIGVNGFGSPAESKYSMMQRMTSSSSSPSLLNDGAKNFSHSAHDLFHG
ILAVGPGQSCGSMESSPWTTQSSFPLPLCPLPDPVNSPTSSLFSDFGALSISQRRKAPNP
AASEFIPKGAPRMATMVQSSAPAFPSPLFPHPGLSGSSAAALAPGMSLSAGSSPLHSPKI
TPHTSPAPRRRSHTPNPNNPNQANYMVPTSVSDQGAHIIQKETVGGTTYFYTDNSPAPMA
GMVFPTYHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQSENPGVPS
EVDSYHSLFPLEPLPPPSRLQKTSNFSYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCM
MLVDMWKKIQHSNSVSLREVFTTKAFGDHSLVFSYDFHAGAETMFSRHFNDPTTDSYFTK
RKWGQHEPPPPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPSKILITGKTRL
RVNCVGVFDVLTFDSSQTNHLALMPQYQQADLISLGKVVLALACNSLAGIQRENLQKAME
LVSINYSSDLKNLILYLLTEQSRLRSVNDIMPMIGARFYTQLDASQMRNDVIEEDLAKEV
QNGRLFRLLAKLGTINERPEFQKDHTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHI
VSCLNKLDAGVPEKISLVSRDEKSVLVVTYSDLKRCFESTFQELQQAATGPV
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgaacagtggactcccagcttcagctgctccgctcggaggtgttggaataccctgcgtc
aaggtgaagttctgccgatactacgctaaggacaagacttgcttttatggagacgagtgt
cagtttttgcacgaggagccgtccatgggaagcatgtcccttcacggcggaggaagccct
gtccctttatccatggctggaggagccgtgactgcagcgggatacccgcttagtgcacaa
ccgccttgcccggtcggggtacccaacgtccccaaaaagaacgactctatgggttctgca
agcacgactctggagggacagctgttaaccatccctgggatggagggaggagccctgagt
gatgccaatttgacaaactcctacttcagcagcagcttcatcggggtcaatggctttggg
agccctgcagaatctaaatactcaatgatgcagagaatgaccagcagcagcagttctcct
agtctccttaatgacggtgccaagaacttcagccacagcgctcacgatctattccatgga
atcctcgcagttggaccaggtcagagttgtgggtcgatggaaagctccccttggacaaca
caatcttcattccctctccctctatgtcctcttccagatccagtgaattcccccacatcc
tcactcttcagtgactttggtgctctgagcatatcacagagaagaaaggctcccaaccca
gcagccagcgagttcatccctaagggggccccacgcatggctaccatggtccagtccagt
gccccggctttcccctcacctctgttcccccacccagggctcagtggctcctctgctgct
gcccttgcacctgggatgtctctctctgcagggtcctcccccctccactcccctaaaatc
accccccatacgtcccctgccccacgccggcgcagccacaccccaaaccccaacaacccc
aaccaggccaactacatggtgcccaccagcgtgtcggaccaaggggcccacatcatccag
aaggagacggtgggggggaccacctacttctacaccgacaacagccccgcccccatggcc
gggatggtgtttccgacctaccacatctaccctcccactgccccccatgtggcttacatg
cagcccaaagccaacgctccgtccttcttcatggccgatgaactccgacaggagctgata
aacaggcatctgatcaccatggctcagatcgaccagtcggagaacccaggtgttccgtca
gaggtggacagttaccacagcctgttcccgctggagcccctcccccctcccagccgcctg
cagaagaccagcaacttcagctacatcacttcctgctacaaagctgtcaacagcaaagat
gatctgccttactgcctgaggaggatacatggtttcaggttggtgaacaccaagtgcatg
atgctggtggacatgtggaagaagatccagcactcaaactcagtctccctgagggaggtg
ttcaccaccaaggcctttggagaccactcgttggtgttttcctatgacttccatgccggg
gcagagaccatgttcagccggcacttcaatgaccccaccaccgactcctatttcaccaag
aggaagtggggacagcacgagccccctccaccgaggcagcacgctggtctcctccccgag
tccctgatctgggcctacatcgtccagctgagctcggccctcagaaccatccacaccgcc
ggcctggcctgccgggttatggaccccagcaagatcctcataaccggcaagaccaggtta
cgggtgaactgtgtcggagtgtttgatgtcttaacctttgacagcagtcagaccaaccat
ctggccctgatgcctcagtaccagcaagcggatctgatctccctgggcaaggtggtgttg
gccctggcgtgtaactctctggctggcattcagagagagaacctgcagaaggccatggag
ctggtgtcaatcaattactcatcagacctcaagaacctcatcctctatctgttgactgag
cagtcgcggttacgtagtgttaatgacataatgccgatgatcggagctcggttctacaca
caactggatgcatcacagatgaggaatgatgtcatcgaggaggacctggctaaggaggtg
cagaatggccgtctcttccgtctgctggccaagctgggcaccatcaacgagaggccggag
tttcagaaggatcatacgtggtccgagacaggcgaccgctacctgttgaagctcttcagg
gaccacctgttccaccaggtgacggaggctgggaccccctggatagacctcagccacatc
gtgtcctgtctcaacaaactggacgcgggcgtgcctgagaagatcagcctggtgtctcgt
gatgagaagagtgtcctggtggtcacctactccgacctgaagcgctgctttgagagcacc
ttccaggagctgcagcaggctgccacaggccccgtgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (44)   

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