KEGG   Esox lucius (northern pike): 105027398
Entry
105027398         CDS       T04894                                 
Symbol
vcl
Name
(RefSeq) vinculin isoform X1
  KO
K05700  vinculin
Organism
els  Esox lucius (northern pike)
Pathway
els04510  Focal adhesion
els04520  Adherens junction
els04810  Regulation of actin cytoskeleton
els04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:els00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105027398 (vcl)
   04520 Adherens junction
    105027398 (vcl)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105027398 (vcl)
   04810 Regulation of actin cytoskeleton
    105027398 (vcl)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:els04812]
    105027398 (vcl)
   04147 Exosome [BR:els04147]
    105027398 (vcl)
Cytoskeleton proteins [BR:els04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     105027398 (vcl)
Exosome [BR:els04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   105027398 (vcl)
SSDB
Motif
Pfam: Vinculin Talin_R4 Mob_Pre
Other DBs
NCBI-GeneID: 105027398
NCBI-ProteinID: XP_010897798
Position
LG06:2152892..2186896
AA seq 1068 aa
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKD
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAASMLKSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIKIFVTTKTSGSQGVEESLKNRNFTFEKMSAE
INEIIRVLQLTSWDEDAWANKKDTEAMKRALALIDSKMTQAKNWLRDPNAQPGDSGEQAI
RQILDEAGKVGELCAGKERRDIVGTAKTLGQITDQVSEMRARGQGASSAALQRAQQVSQG
LDVLTGKVENAARKLEAMTNSKQVIAKRIDAAQNWLADPNGGPEGEENIRALLSEAKRIA
DMCEDPKERDDILRSIGEIAGLTAKLSDLRRHGKGDSPEARALSKQIATALQNLQSKTNR
AVANSRPAKAAVHLEGKMEQAQSWMENPTIDDGGVGQAAIRALASEGRRLATALPGPYRQ
ELLGKCEQVEQLMAQLADLAARGEGDSPQARAVAQQLQEALKDLKGTMQEAMTQEVSDIF
SDTTTPIKLLAVAATAPSDAPNRDEVFNERAANFENHANRLGATAEKAAAVGTTNKSTVE
GIQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDQAIDT
KSLLDASEEAIKKDLDKCRVAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REMVKAASDELSQTISPMVMDAKAVAGNITDPSRQKGFLDSGYNILEAVAKVRDAFQSQE
PDFPPPPPPDLDQLQLSDEPAPPKPPLPQGEVPPPRPPPPEEKDEDFPEQAVGEMVSEPM
MMAARQLHEEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKAS
DEVTKLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQ
ATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWVRKTPWYQ
NT seq 3207 nt   +upstreamnt  +downstreamnt
atgccggtttttcacacaaagacgatagaaagtatcctagagccggtggctcagcagata
tcccatctggtgataatgcacgaggaaggtgaggtggacgggaaagctatcccggatctc
accgccccggtggctgcggtgcaggcggctgttagcaaccttgtccgggtgggtaaagac
actgtccagacaactgaagaccagataatgaagagagacatgcctccagctttcatcaag
gttgagaacgcttgcaccaagctggtccaggcagcatccatgttgaaatcagacccctac
tctgttcccgctagagactacctcattgacggctctcggggcatcctctctggcacctcg
gacctcctgttgaccttcgacgaagctgaggttcgtaaaatcatccgcgtgtgcaaaggc
atcttggagtacctgacagtggccgaggtggtggagtccatggaggacctgatcacatac
acaaagaacctgggaccagggatgacgaagatggcgaagatgattgatgagcgacagcaa
gagctgacccaccaggaacatcgtgtgatgctggtcaactccatgaacaccgtcaaagag
ctgctgcctgtactcatttctgggatcaagatcttcgtgacgaccaagacgtctgggagc
cagggagttgaggagtccctgaagaacaggaacttcacctttgagaagatgagcgctgag
atcaacgagataatcagggtgttgcagctcacttcctgggacgaggacgcgtgggccaat
aagaaggacacggaggccatgaagagagctttggcactcatcgactctaagatgacccag
gccaaaaactggctgagggaccccaatgcccaaccaggggattcaggagaacaggcgatc
cgtcagattctggacgaggctgggaaggtgggagagctgtgtgccgggaaagagaggagg
gatatcgtgggcacggccaaaaccctgggccagatcaccgaccaggtgtctgagatgagg
gccaggggtcagggggcttcttctgcagctttgcaacgggctcagcaggtctcccagggg
ctggacgttctcactgggaaggtagagaacgcagcccggaaactggaagccatgaccaac
tccaaacaagtcatcgccaagagaattgacgctgctcagaactggctggcagaccccaac
ggaggtcctgagggggaggagaacatccgggctctcctgtctgaggccaagaggatcgct
gacatgtgtgaggaccccaaagagagggacgatatcctgaggtccatcggagagattgca
ggcctcaccgccaagctgtcagatctccggagacatggtaaaggtgacagcccggaggcc
agggcgttgtccaagcagatcgccaccgccttacagaacctgcagtccaagaccaacagg
gcagtagccaatagcaggccggccaaggccgcggtccacctggaggggaagatggaacag
gcacagagctggatggaaaaccccaccatagacgatgggggagtgggccaggcagctatc
cgagctctggcatcagaaggccgtcgcctggctactgccctaccgggtccttacaggcaa
gagctgctgggaaagtgtgagcaggtggagcagctcatggcccagctagccgacctggcg
gctcggggggagggcgactccccacaggcgcgcgcggtggcccagcagcttcaggaggcc
ctgaaagacctcaaaggaacgatgcaggaagcgatgacccaggaggtgtcggacatcttc
agtgacacgaccacgcccattaaactgctggctgtggcggccactgccccctccgacgcc
cccaacagggatgaggtgttcaacgagagggctgccaactttgagaaccacgccaaccgg
ctgggggccacagctgagaaggctgctgctgtaggaaccaccaacaagagcacggtagaa
gggatccaggcagctgtcaagtctacacgggacctcactccacaggtcgtctctgctgca
cgtatcctactgagaaaccccggcaaccaggctgcgtacgagcactttgagacgatgaag
aaccagtggatcgacaacgtggagaaaatgacaggtttggtggaccaggcaatagacact
aagtccctgttggacgcctctgaggaggccatcaagaaagacctggataagtgccgtgtg
gctatggccaaccaccagcctcagatgttggtggctggggcgaccagcatcgcccggcgg
gccaaccggatcctcctggtggccaaacgagaggtagagaactctgaagatcccaagttc
agagagatggtgaaggctgcgtctgatgaactcagtcagacgatctctccaatggtgatg
gatgccaaggccgtggcagggaacatcactgatccaagtcggcaaaagggctttctggac
tctggttataatatccttgaggcagttgccaaggtgagagatgccttccagtctcaggaa
ccagatttcccaccaccaccacctccagatctggaccagctgcagctgtccgatgagccc
gccccacccaaaccccccctaccccagggcgaggttcctccacccaggcctcctccccca
gaggagaaggacgaggacttccctgagcaggcggtgggagagatggtcagcgagcccatg
atgatggctgcaagacagctccacgaggaggcgcggaagtggtccagcaagggtaacgac
atcatcggcgcagccaagcgcatggccctgctcatggctgagatgtcccgtctggtgcgt
ggcggcagtggcaacaagcgcgccctcatccagtgtgccaaagacatcgccaaggcctcg
gatgaggtcaccaagctggccaaagaggtggcgaagcagtgcactgacaaacgcattcga
accaacctgctccaggtatgtgagcgtatccctaccattagcacacagcttaagatcctc
tctacggtcaaagctaccatgttgggtcgtaccaacatcagtgaggaggagtcggagcag
gctacggagatgttggttcacaatgcccagaacctcatgcagtctgtgaaggagacggtc
agagaagccgaggcagcctccatcaagatccgaacggatgccggtttcaccctccactgg
gtccgaaagaccccttggtaccagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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