KEGG   Esox lucius (northern pike): 105030478
Entry
105030478         CDS       T04894                                 
Name
(RefSeq) polyadenylate-binding protein 1-like
  KO
K13126  polyadenylate-binding protein
Organism
els  Esox lucius (northern pike)
Pathway
els03015  mRNA surveillance pathway
els03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105030478
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105030478
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:els03019]
    105030478
   03041 Spliceosome [BR:els03041]
    105030478
Messenger RNA biogenesis [BR:els03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     105030478
   mRNA cycle factors
    Stress granule specific factors
     105030478
Spliceosome [BR:els03041]
 Complex C
  Other components
   Complex C specific factors
    105030478
SSDB
Motif
Pfam: RRM_1 Nup35_RRM RRM_5 RRM_7 RRM_occluded Peptidase_S49_N
Other DBs
NCBI-GeneID: 105030478
NCBI-ProteinID: XP_019902063
Position
LG05:31628696..31630568
AA seq 475 aa
MNSLYVGDLHQNVSEADLNGMFSEAGPIFSIRVCRDRITRCSLGYAYVNYYQPAHAERAL
LMFSDHTLAGRYLRIMRSDPDPVRRKSGVGKLFIKNLNKKTIGNKNLCETFSVFGDIYSR
KVVYDENGESKGYGYIQYETQASADRATEKLNGMLLDDEKVSITRFKSRKEREDELGAKA
REFNNVFVKNFDTDMNDKKLTELFEEYGPIVSAKVMTDDSGKSKGFGFVCFQRHEDALKA
IYEMNRKEVNGRLIYVGRAQKKAERQAVLKNQFGQMKTETKAGYRGINLFVKNLDEAYDG
YHLKKAFSPFGKVISAKVMMEGGRHKGFGFVSFSSTEEANRALTEMNGRILGTKALYVAP
AQTKAQRQEYLANQHKHWMTNAADFYSSNKGVQGNPSHHRETRVSGMLPAQRMATQDQGQ
QSPAATADTDTSVPLQKDKTCAAGDSKTNQMLTTTVHIQVQEPNKAKAGRICAKR
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgaattctttgtatgttggcgacctccaccaaaatgttagcgaggcagaccttaatggg
atgtttagtgaggccggacccatcttttccatccgtgtctgcagggatcggatcacacgc
tgctccctgggctatgcctacgtcaactattatcagccggcccatgcagagcgtgccctg
ctcatgttcagcgaccacacacttgcaggaagatatctgcgcatcatgaggtcggaccct
gaccctgtccggaggaagagtggagtgggaaaactcttcatcaagaacctgaacaaaaag
accattggaaataagaacctgtgcgagaccttctcagtttttggagacatttactctcgc
aaggtggtttatgacgagaatggtgaatccaagggctatggatacatccagtatgagacc
caggcctccgccgatagagccactgagaaacttaatgggatgctgctggatgatgaaaaa
gtatccatcacaagattcaaatctcgcaaagaacgagaggatgaacttggagccaaggcc
agagagttcaacaacgtatttgtaaagaactttgacactgacatgaatgacaagaagctg
actgagctattcgaggaatatggtccgatcgtgagcgccaaggttatgacggacgacagc
gggaagtccaaggggttcggattcgtttgcttccagagacatgaggatgcactgaaagcc
atatacgaaatgaacaggaaggaagtaaacgggaggctgatctatgtaggtcgtgctcag
aaaaaagcagaacgccaggcagtgctgaagaaccaatttggccagatgaagactgaaacc
aaggctggatacagaggaatcaacctctttgtaaagaacctggatgaagcttatgatggt
taccatttaaaaaaggcgttctctccatttggaaaggtcatcagcgccaaggtgatgatg
gagggtggccgtcacaaaggttttggcttcgtttccttctcctccaccgaggaggccaac
agggccttgacagagatgaatggccgtatcttgggaaccaaggcgctatacgtggctccg
gctcagacaaaggcacagcgccaagaatacctggccaaccagcacaagcactggatgaca
aatgctgccgacttctactccagcaacaaaggggttcaggggaatcccagccatcacagg
gagacccgcgtgtctggcatgcttcccgctcagaggatggccacccaagaccagggccag
caatcacctgccgccactgccgacacagacacgagcgtgcctctgcaaaaggacaaaaca
tgtgcagctggcgacagcaaaactaaccaaatgctgaccacgacagtccatattcaagta
caagagccaaacaaggcgaaagcaggaagaatctgtgccaaacgctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (40)   

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