KEGG   Escherichia coli O157 H7 Xuzhou21 (EHEC): CDCO157_3310
Entry
CDCO157_3310      CDS       T02122                                 
Name
(GenBank) S-ribosylhomocysteinase
  KO
K07173  S-ribosylhomocysteine lyase [EC:4.4.1.21]
Organism
elx  Escherichia coli O157:H7 Xuzhou21 (EHEC)
Pathway
elx00270  Cysteine and methionine metabolism
elx01100  Metabolic pathways
elx01230  Biosynthesis of amino acids
elx02024  Quorum sensing
elx02026  Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:elx00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    CDCO157_3310
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CDCO157_3310
   02026 Biofilm formation - Escherichia coli
    CDCO157_3310
Enzymes [BR:elx01000]
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.21  S-ribosylhomocysteine lyase
     CDCO157_3310
SSDB
Motif
Pfam: LuxS DUF749
Other DBs
NCBI-ProteinID: AFJ30367
Position
complement(3466041..3466556)
AA seq 171 aa
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF
AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADVWKAAMEDVLKVQDQNQI
PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEKLQELHI
NT seq 516 nt   +upstreamnt  +downstreamnt
atgccgttgttagatagcttcacagtcgatcatacccggatggaagcgcctgcagttcgg
gtggcgaaaacaatgaacaccccgcatggcgacgcaatcaccgtgttcgatctgcgcttc
tgcgtgccgaacaaagaagtgatgccagaaagagggatccataccctggagcacctgttt
gctggttttatgcgtaaccatcttaacggtaatggtgtagagattatcgatatctcgcca
atgggctgccgcaccggtttttatatgagtctgattggtacgccagatgagcagcgtgtt
gctgatgtctggaaagcggcaatggaagacgtgctgaaagtgcaggatcagaatcagatt
ccggagctgaacgtctaccagtgtggcacttaccagatgcactcgttgcaggaagcgcag
gatattgcgcgtagcattctggaacgtgacgtgcgcatcaacagcaacgaagaactggcg
ctgccgaaagagaagttgcaggaactgcacatttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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