KEGG   Escherichia coli O157 H7 Xuzhou21 (EHEC): CDCO157_3900
Entry
CDCO157_3900      CDS       T02122                                 
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
  KO
K02986  small subunit ribosomal protein S4
Organism
elx  Escherichia coli O157:H7 Xuzhou21 (EHEC)
Pathway
elx03010  Ribosome
Brite
KEGG Orthology (KO) [BR:elx00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    CDCO157_3900 (rpsD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:elx03011]
    CDCO157_3900 (rpsD)
Ribosome [BR:elx03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    CDCO157_3900 (rpsD)
  Bacteria
    CDCO157_3900 (rpsD)
  Archaea
    CDCO157_3900 (rpsD)
SSDB
Motif
Pfam: Ribosomal_S4 S4 S4_2
Other DBs
NCBI-ProteinID: AFJ30958
Position
complement(4103327..4103947)
AA seq 206 aa
MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQK
VRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSH
KAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEG
TFKRKPERSDLSADINEHLIVELYSK
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcaagatatttgggtcctaagctcaagctgagccgtcgtgagggcaccgacttattc
cttaagtctggcgttcgcgcgatcgataccaagtgtaaaattgaacaagctcctggccag
cacggtgcgcgtaaaccgcgtctgtctgactatggtgtgcagttgcgtgaaaagcaaaaa
gttcgccgtatctatggtgtgctggagcgtcagttccgtaactactacaaagaagcagca
cgtctgaaaggcaacaccggtgaaaacctgttggctctgctggaaggtcgtctggacaac
gttgtataccgtatgggcttcggtgccactcgtgcagaagcacgtcagctggttagccat
aaagcaattatggtaaacggtcgtgttgttaacatcgcttcttatcaggttagtccgaat
gacgttgtaagcattcgtgagaaagcgaagaagcagtctcgcgtgaaagccgctctggag
ctggctgagcagcgtgaaaagccaacctggctggaagttgatgctggcaagatggaaggt
acgtttaagcgtaagccggagcgttctgatctgtctgcggacattaacgaacacctgatc
gtcgagctttactccaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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