KEGG   Escherichia coli O157 H7 Xuzhou21 (EHEC): CDCO157_4262
Entry
CDCO157_4262      CDS       T02122                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
elx  Escherichia coli O157:H7 Xuzhou21 (EHEC)
Pathway
elx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:elx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CDCO157_4262 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:elx03021]
    CDCO157_4262 (rpoZ)
   03400 DNA repair and recombination proteins [BR:elx03400]
    CDCO157_4262 (rpoZ)
Enzymes [BR:elx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CDCO157_4262 (rpoZ)
Transcription machinery [BR:elx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CDCO157_4262 (rpoZ)
DNA repair and recombination proteins [BR:elx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CDCO157_4262 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AFJ31318
Position
4493226..4493501
AA seq 91 aa
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN
NQILDVRERQEQQEQEAAELQAVTAIAEGRR
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcacgcgtaactgttcaggacgctgtagagaaaattggtaaccgttttgacctggta
ctggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccg
gaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaac
aaccagatcctcgacgttcgcgaacgccaggaacagcaagagcaggaagccgctgaatta
caagccgttaccgctattgctgaaggtcgtcgttaa

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