KEGG   Escherichia coli O157 H7 Xuzhou21 (EHEC): CDCO157_4602
Entry
CDCO157_4602      CDS       T02122                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
elx  Escherichia coli O157:H7 Xuzhou21 (EHEC)
Pathway
elx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:elx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CDCO157_4602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:elx03400]
    CDCO157_4602
Enzymes [BR:elx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CDCO157_4602
DNA repair and recombination proteins [BR:elx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CDCO157_4602
SSDB
Motif
Pfam: PriA-like_WH PriA_3primeBD DEAD PriA_C ResIII Helicase_C PriA_CRR AAA_30 zinc-ribbons_6 AAA_19 AAA_22 TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AFJ31652
Position
complement(4852843..4855041)
AA seq 732 aa
MPVAHVALPVPLPRTFDYLLPEGMAVKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNEL
KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA
TEQGHAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET
PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQQHLRCHHCDSQRPVPRQCPSCG
STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI
LSSPLADDKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK
VKWVLDVDPIEG
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgcccgttgcccacgttgccttgcccgttccgcttcctcgtacctttgactatctcctg
ccagaaggcatggcggttaaagccgggtgtcgcgtgcgcgtgccgtttggcaaacagcag
gagcgcatcggggttgtggtgtcagttagcgacgtcagtgagctgccgcttaacgagcta
aaagcggtagtcgaagtgctggatagtgagccggtgtttactcactccgtctggcgattg
ctgctctgggcggcggattactatcatcatccgattggcgatgtgctgtttcatgccttg
ccgattttactgcgccaggggcggcctgcggcgaacgcgccgatgtggtactggtttgcc
actgaacaaggccatgcggtggatctgaacagcctgaaacgttcgccaaagcaacaacag
gcactggcggcattgcggcaaggcaaaatctggcgcgaccaggttgccacgcttgaattt
aatgatgccgcgttacaggcgctgcgcaaaaaaggtctgtgtgatttagcaagtgaaaca
ccagagtttagcgactggcgaacgaactatgccgtttctggtgaacggttgcgattgaat
accgaacaggccaccgccgttggcgcaattcatagcgcggcggataccttctctgcttgg
ctgctggcgggcgttacaggttccggtaaaacagaggtttatttgagcgtactggaaaac
gtgctcgctcagggcaaacaggcgctggtgatggtgccggaaatcggcctgacaccgcaa
actatcgcccgttttcgtgaacgttttaatgcccccgtagaagttctgcattccggcctg
aacgacagcgagcgtctttcggcgtggttgaaagcgaaaaatggtgaggcggcgattgtc
atcggcacccgctccgcgctgtttacgccgtttaaaaatctcggtgtgattgtcattgat
gaagagcacgacagttcctacaagcagcaggaaggctggcgctatcatgcccgcgacctg
gcggtttatcgtgcgcacagcgagcaaatcccgattattcttggctccgcaacacccgca
ctggaaacgttatgcaacgtccagcagaaaaaataccgcctgctgcgcctgacgcgtcgg
gcggggaatgcgcgtccggcaattcaacatgtgctggatttaaaaggtcagaaggtgcag
gcggggctggctccggcgttaatcacccgtatgcgccagcatttacaggccgacaaccag
gttatcctctttcttaaccgccgtggctttgcgcctgccttgctgtgccacgactgcggc
tggattgccgaatgtccacgttgcgatcactactacacgctgcatcaggcgcaacagcat
ttgcgctgtcaccactgtgacagccaacgcccggtgccgcgccagtgcccttcctgcggt
tccacgcacctggtacccgtggggctgggcaccgaacagcttgaacagacgctcgcgccg
ttattccctggtgtgcccatttctcgtatcgaccgcgataccaccagccgcaaaggagcg
ctggaacaacaactggcggaagtgcatcgcggcggcgcgaggatattgattggcacgcaa
atgctggcgaaaggtcaccactttccggatgtgacgctggtagcgttactggatgtggac
ggcgcgctgttttctgccgattttcgctcggcagagcgttttgcccagctatacacccag
gtagcaggccgtgccgggcgtgcgggtaaacagggcgaagtggtgctgcaaacgcatcat
ccggaacacccgctattgcaaacgttgctctataaaggctacgacgcttttgccgaacag
gcactggctgagcggcgaatgatgcaactgccgccgtggaccagccatgtgattgtgcgt
gcggaagatcataacaatcagcacgcgccattgttcctgcaacaactgcgtaatctgatc
ctctccagcccgctggcagacgacaaattgtgggttctcggtccggttccggcactggca
cctaaacgtggcggtcgctggcgctggcagatattgttgcagcacccttcccgcgtgcgc
ttgcaacacatcattaacggtacgctggcactcatcaatacaataccggattcccgtaag
gtgaaatgggtgctggatgttgatccgattgagggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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