KEGG   Elusimicrobium minutum: Emin_1167
Entry
Emin_1167         CDS       T00741                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
emi  Elusimicrobium minutum
Pathway
emi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:emi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Emin_1167
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:emi03019]
    Emin_1167
   03016 Transfer RNA biogenesis [BR:emi03016]
    Emin_1167
Enzymes [BR:emi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Emin_1167
Messenger RNA biogenesis [BR:emi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Emin_1167
Transfer RNA biogenesis [BR:emi03016]
 Prokaryotic type
  tRNA degradation factors
   Emin_1167
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 KH_1 PNPase KH_2
Other DBs
NCBI-ProteinID: ACC98718
UniProt: B2KDX2
Position
complement(1265092..1267188)
AA seq 698 aa
MSNINKTTQDVIVGDKTLSLETGWVAKQADGSVIARMGDTMVLATAVSDKVQKPGISDFV
PLTVNYKERTYAAGKIPGGFFKRESRASKKETLASRIIDRSLRPLFPSGYTCETNVTAMV
LSADGVYDTEVLAVMASSTALIISSIPFTTPVAAVRIGRLNGNFIVNPTLEEQKSCDMDL
IISGSLEGMLMVEGGAKEVSEEDVIKALETAKPAIDILCKAQLELKEKAGKEKFSFQAET
VPQDVVDLGNNKYRAEVANILNAFYDKQTRDVKIAELKAAFAEEIKEAHGDNASTFAGIT
MENLSYEESRKLVLEKGVRVDGRKTDEIRQLNSITGLLPRAHGSALFTRGQTQGLVVTTL
GTSGDAQLVESLEESYDETFMLHYNFPGFSTGECKPDRAPGRREIGHGELARRALLPLIP
DADKFPYTIRVVSDIMESNGSSSMASVCGGSLSLFDAGVPMKAACSGIAMGLIKEGDKYA
VLSDIMGLEDHLGDMDFKLTGSRNGITAFQMDVKLAGGISIEILKEAVAQATKGRMHIMD
HMDSVLPEPRKDVSKFAPVIYTMRIPQDKIGALIGPGGKNIKRITETTDTKIDINDDGVV
QIAAVNGDKLAMAKAEIELLTAEVELNKIYKGKVVSIQPFGAFVELIPGKDGLLHISEID
KKRINKVEDVLKMGDIVEVKVVEIDNNGKVRLSRKVLL
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgtctaatataaataaaacaacccaagacgtcatagtgggagataaaactctatcactg
gaaacgggctgggtagcaaaacaggcagacggcagcgtaatagcccgcatgggtgataca
atggtgcttgccacagcagtttcagataaagtgcaaaaacccggaatttccgactttgtt
cctttaaccgttaattataaagaaagaacatacgccgcgggtaaaatccccggcggtttt
ttcaaaagagaatcaagagccagcaaaaaagaaaccttggcaagccgcatcattgaccgt
tctttaagacctttgttcccttcaggctatacctgcgaaacaaatgttaccgctatggta
ttatcggccgatggtgtttatgatacagaagttcttgccgtaatggcatcgtcaacggct
ttgattatctcttctattccgttcacaacgcctgttgccgcggtaagaatcggcagactt
aacggcaattttatcgtcaaccctaccttagaagaacaaaaatcatgtgatatggacctt
atcatatcaggttctttagaaggcatgcttatggttgaaggcggcgctaaagaagtttcc
gaagaagacgttattaaagctttagaaacagccaaacccgctattgatattttatgcaaa
gcgcagcttgaacttaaagaaaaagccggtaaagagaaattcagcttccaggcggaaact
gttccccaggatgtagttgatttgggtaacaataaatacagagctgaagtcgcaaatatt
ttaaacgctttttacgacaagcagacaagagacgttaaaatagccgagcttaaagccgct
ttcgcggaagaaattaaagaagcccacggcgataacgcttccaccttcgcgggtattacg
atggaaaatctttcttatgaagaatcccgcaaactcgtgcttgaaaaaggtgttcgcgtc
gatggcagaaagaccgacgaaatcagacagcttaacagcatcaccggtttacttcccaga
gcgcacggttcggctttatttacaagaggccagacacagggcttagtggttaccacatta
ggcacatcgggcgacgcccagcttgttgaaagcttagaagaaagctatgatgaaacattt
atgcttcactataacttccccggtttttccactggcgaatgtaaacctgacagagccccc
ggcagacgtgaaatcggccacggcgaacttgcgagaagagcacttttacctttaattccg
gacgcggataaatttccttacacaataagggttgtatccgacattatggaatcaaacggt
tcaagctcaatggcaagcgtttgcggcggttctttatccttatttgacgcaggcgttccc
atgaaagccgcgtgctcgggcattgccatgggtcttattaaagaaggcgataaatacgcg
gttctttccgatattatgggccttgaagaccacctcggagatatggactttaagcttacc
ggttcacgcaacggtataaccgctttccagatggacgttaaattagcgggcggtatttct
atagaaatattaaaagaagccgtagcgcaggccacaaaaggcagaatgcatattatggac
catatggacagcgtgttacctgaacccaggaaagacgtttccaaattcgctcccgtcatt
tatacaatgaggattcctcaagataaaataggcgccttaataggccccggcggtaaaaat
atcaaaagaattaccgagacaacggatacaaaaattgatattaatgacgacggcgttgtg
cagatagccgcggtcaacggtgataaacttgccatggctaaggccgaaatcgaactttta
accgcggaagttgaacttaacaaaatctacaaaggcaaagtagtttcaatacagcctttt
ggcgcttttgttgagcttattcccggtaaagacggcttgctccacatctctgaaatcgac
aaaaaacgcattaataaggttgaagatgtccttaaaatgggcgatattgttgaagttaaa
gttgtggaaattgacaacaacggcaaagtccgcttgtcacgcaaagtattgctttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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