KEGG T00741: Emin

Elusimicrobium minutum: Emin_1227

Entry

Emin_1227 CDS T00741

Definition

DNA ligase, NAD-dependent (EC:6.5.1.2)

Orthology

K01972

DNA ligase (NAD+) [EC:6.5.1.2]

Organism

emi Elusimicrobium minutum

Pathway

emi03030	DNA replication
emi03410	Base excision repair
emi03420	Nucleotide excision repair
emi03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:emi03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:emi03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:emi03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:emi03430]

SSDB

Motif

Pfam:

DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT HHH

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1326624..1328594)

AA seq 656 aa
MDKIKKEIEDLRSKINYHNNLYYNLDNAEISDAEYDGLYARLKFLEAMNPDYADAASPTQ
KIGGAASRVFTSVTHASQMMSLDNTYSSEEVLRWHERCVKSLGHGNFEMVAEAKIDGVSC
SLTYEGGVLTVAATRGDGKTGEDVTANIKTIKTIPHNISFKNKIEIRGEIYIEKADLKRL
NEIQENEGENIFANTRNAAAGSIRQKNAEISASRPLKFFAHSFGYGDVDVKGFAEFMDLC
KSWGFSVTPNRIRTADINEITSFYKRFEELRAGLPYDVDGIVVKINSFAEQKILGVTAKS
PRWAIAFKYKPPQGKTVVNKIIFSVGRTGIITPVAELEPVAVAGVIISNATLHNFDEIKR
LGVKEGDTVIVERAGEVIPKILNVVKDGGGNEVKAPKNCPSCGSKVYRYEDEVAIRCINP
ACPAQIKGHLLHFVSRAAMDIDGFGEAVVEQVVEKKYVKDFADIYNLKAEQLLTLDLFKD
KKVNNLLLAVEASKKRSLSRVLYAFGIRHVGQKTGEILANHFEDIENMLAASLEDFQKIN
EIGPVVGQSVYDFMQSAKGKEEIARLKTAGVNFTQPKVQLAGNELLGKTLVFTGELNMPR
TQAEALAKAHGGKVSGSVSSKTSYVVAGADAGSKLTKAQSLGVSVISEEEFLNLIK

NT seq 1971 nt +upstreamnt +downstreamnt
atggacaaaattaaaaaagagatagaagatttaagaagcaaaatcaactatcataataac
ctttactacaatttggacaatgccgaaatttcggatgcggagtatgacggtttatacgcc
aggctgaaatttttggaagccatgaaccccgactatgcggacgccgcgtcgcccacacaa
aaaatagggggcgctgcttcgcgcgtttttacgtctgttacgcacgcttcgcaaatgatg
tccttagacaacacctattcctccgaagaggttttgcgctggcatgaacgctgcgtaaaa
agtttgggccacggaaattttgaaatggtggccgaggctaaaattgacggcgtttcctgc
tcgcttacttatgaaggcggcgttttaacggttgccgccacaaggggcgacggcaaaaca
ggtgaggatgttaccgcaaatattaaaacaataaaaacaattccgcataatatttctttt
aaaaataaaatagaaatacggggcgagatttatatagaaaaagcggacttaaagcggctt
aatgaaatacaggaaaacgaaggggaaaatatttttgccaacacccgtaacgccgcggcg
ggcagcataaggcaaaaaaacgcggaaataagcgcctcgcgccctttaaaatttttcgcc
cattcattcggttacggcgatgttgatgttaaaggttttgcggagtttatggatttatgt
aaatcatggggattttcggttacgccaaatagaataagaacggcggatattaatgaaata
acgagtttttataaaaggtttgaggaactaagggcgggtttgccctatgacgttgacggc
attgtcgttaaaataaacagttttgccgagcaaaaaattttaggcgttaccgccaaaagc
cctcgctgggcgatagcttttaaatataaaccgccgcagggcaaaacagttgtaaataaa
ataattttttcagtgggaaggacgggtattattactccggttgccgagttagaacctgtt
gccgtggcgggcgttataatttcaaacgctactcttcataattttgatgaaataaaacgc
cttggcgtaaaagagggggacactgttattgtagagcgcgcgggggaagttatacccaaa
attcttaatgttgttaaagacggcggcggcaatgaagttaaggctcctaaaaactgtcct
tcctgcggttctaaagtttaccggtatgaggatgaagttgccataagatgcataaacccc
gcctgcccggcgcagataaaggggcatttgcttcattttgtttcgcgcgcggccatggat
attgacggttttggcgaagccgtggtcgagcaggttgttgaaaaaaaatatgttaaagat
tttgccgatatctacaatttaaaagcggagcagcttttaacgctggacctttttaaagat
aaaaaagtaaataatcttttattggcggtggaagcttctaaaaaacgttctttaagccgt
gttctgtacgctttcggcataaggcacgtaggccagaaaacgggtgagatactcgccaac
cattttgaggatattgaaaatatgcttgccgcttctttagaagactttcaaaaaataaat
gaaataggcccggtggtaggtcaaagtgtttatgattttatgcaaagcgcaaaaggcaaa
gaagaaattgccaggcttaaaacggctggcgttaatttcacgcagcctaaagtgcaactg
gctggtaatgagcttttgggcaaaacgcttgtttttacgggtgaactcaatatgcccaga
acgcaggccgaagcgcttgccaaagcgcacgggggcaaagtgtcgggctcggtttcttcc
aaaacaagttatgtcgtggccggagcggacgccggcagcaaacttaccaaggctcaaagc
ttaggcgtaagcgtgataagtgaagaggaatttttaaatttgataaaataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-EMI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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