KEGG   Enterococcus mundtii: EMQU_1606
Entry
EMQU_1606         CDS       T02931                                 
Symbol
ligA
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
emu  Enterococcus mundtii
Pathway
emu03030  DNA replication
emu03410  Base excision repair
emu03420  Nucleotide excision repair
emu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:emu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EMQU_1606 (ligA)
   03410 Base excision repair
    EMQU_1606 (ligA)
   03420 Nucleotide excision repair
    EMQU_1606 (ligA)
   03430 Mismatch repair
    EMQU_1606 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:emu03032]
    EMQU_1606 (ligA)
   03400 DNA repair and recombination proteins [BR:emu03400]
    EMQU_1606 (ligA)
Enzymes [BR:emu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     EMQU_1606 (ligA)
DNA replication proteins [BR:emu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     EMQU_1606 (ligA)
DNA repair and recombination proteins [BR:emu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     EMQU_1606 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EMQU_1606 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     EMQU_1606 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      EMQU_1606 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT BRCT_2 RNA_ligase
Other DBs
NCBI-ProteinID: BAO07163
Position
complement(1671504..1673546)
AA seq 680 aa
MEHEMTIDEATKKAEELRVQLDRWSREYYVLDQPTVEDYIYDKTYAELVAIEEQYPDLIT
ADSPTQRVGGKILSSFEKVTHDIPLYSLNDVFNKEELLAFDQRVQKAIGRPVAYCCELKI
DGLSVSLRYENGEFVRGATRGDGSVGENITENLKTVRSVPIKLKEPMSIEVRGECFMPKR
SFVKLNQKNEEEGKPVFANPRNAAAGSLRQLDSKITAKRNLDTFLYTVADFGPMQATTQY
EALEELDKIGFHTNHEKRLCHSIDEVWAFIEEYHEKRKDLPYEIDGIVIKVNDFSLQDQL
GFTVKAPRWATAYKFPPEEVETVIEEIEWTVGRTGVVTPTAIMTPVRVAGTTVSRASLHN
GDYIQMKDIRLNDTVQIYKAGDIIPEVAQVILDKRPKDSEPYKMPEHCPVCHSELVHLDE
EVALRCINPKCPAQMKEGLNHFVSRNAMNIDGLGPRVLEQMYDKKLVADVADLYKLTEEE
LLTLDKIKEKSANNILTAIDNSKENSVERLIFGLGIRHVGAKAAKILAEHFGDLETLSRS
NFESIIQLDTIGDIIADSVVTYFDNEEVHELMEELKQAGVNLEYKGIRSTQLKEVESPFK
NKTIVLTGKLTRFTREEAKETIENLGGKVTGSVSKKTDFVVVGEDAGSKLTKAQELGVEV
WTEDQMAEALAESHPAEEAE
NT seq 2043 nt   +upstreamnt  +downstreamnt
atggaacacgaaatgacgatcgatgaagcgacaaaaaaagcagaagaactcagagtgcag
ttagatcgttggtctcgtgagtattatgtgttggaccagccaacggtagaagattatatc
tatgacaaaacctatgccgaattagtggcgatcgaagaacaatatccagatctgatcacc
gcagattcaccgacccaacgagtaggtggaaagattctttcctcatttgaaaaagtcaca
catgacattccattatatagtttgaacgatgtcttcaataaagaagaactcttagcattt
gatcaacgtgtccaaaaagcaatcggccgtccagtcgcttattgttgtgaactgaaaatc
gatggactatcggtatctttacgatatgagaatggtgagtttgtacggggagcaactcgg
ggagatggttcggtcggcgaaaatatcacagaaaacttaaaaacggtgcgttctgttcca
atcaaattaaaagaaccgatgagtatcgaagtacgtggtgaatgttttatgccgaaacgt
tcattcgttaaattgaaccaaaaaaatgaagaagaaggcaaaccagtctttgccaatcct
cgtaatgcagcagcaggttcattgcgccagttagattccaagatcacagcgaaaaggaat
cttgatacgttcttatataccgtagcagattttggaccgatgcaagcgacgacgcaatac
gaagcgttagaagaattagacaaaatcggtttccatacgaaccatgaaaaacgtctttgt
cattcaatcgacgaagtttgggcgttcattgaagaataccatgaaaaacgtaaagatctc
ccttacgagattgacgggatcgttattaaagtcaatgatttttcattgcaagaccaatta
ggttttacggtcaaagctccacggtgggcgacggcctataagtttccgccagaagaagta
gagacggtcatcgaagaaatcgaatggacggtcggcagaacgggtgtagtgacaccgaca
gcaatcatgacaccggttcgtgtggctggtacgacagtcagccgtgctagtctgcataat
ggcgattatatccaaatgaaagatatccgcttgaatgatactgtccaaatctacaaggca
ggggatatcatccctgaagtcgcacaagtcattttagataaacgtccaaaagacagcgag
ccttataaaatgcccgaacattgccctgtctgtcacagtgagttggttcatttagatgaa
gaagttgccttgcgttgcatcaatccaaagtgtcccgcacaaatgaaagaaggactgaac
catttcgtttcccgaaatgcgatgaacatcgatggcttaggaccaagagtcttggaacag
atgtatgacaagaagttagtcgctgatgttgctgatctctataaactaacagaagaagaa
ttattgacgttagataaaatcaaagaaaaatcagcgaataatattttaacagcaatcgac
aatagcaaagagaactcggtagaacgtttgatctttggtttaggtatccgtcacgttggc
gcaaaagcagcgaaaatcttagcggagcattttggcgatttagaaacgttgagtcgcagc
aattttgaatcgatcatccaattagatacgatcggggatatcattgcagatagtgtagtg
acttattttgacaacgaagaagtccacgagttgatggaagaacttaaacaagcaggtgtc
aaccttgaatacaaaggcattcgttcgacacagctgaaagaagtagaatcgccgttcaaa
aacaagacgatcgtgttgacaggcaaattaactcgattcacaagagaagaagccaaagaa
acgattgaaaaccttggtggaaaagtcactggcagcgtctctaaaaaaacggatttcgtt
gtcgttggcgaagatgcaggtagtaaattaacgaaagcccaagagttaggtgtcgaggtt
tggacggaagatcagatggctgaagcgttagcggagagtcatcctgctgaggaagcagaa
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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