KEGG   Endosymbiont of unidentified scaly snail isolate Monju: EBS_0128
Entry
EBS_0128          CDS       T04530                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
enm  Endosymbiont of unidentified scaly snail isolate Monju
Pathway
enm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:enm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EBS_0128 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:enm03019]
    EBS_0128 (rhlB)
Enzymes [BR:enm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EBS_0128 (rhlB)
Messenger RNA biogenesis [BR:enm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EBS_0128 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-ProteinID: BAN68116
UniProt: S6BG71
Position
complement(140306..141613)
AA seq 435 aa
MSDKHLTKTRFDSFPFSQALLDGIHDAGFEYCTPIQAATLPLALDGQDVAGQAQTGTGKT
AAFLLAILHLLDQEPADQRRRANQPRALIVAPTRELAIQIHRDAEVLAGHTGHHVRVVYG
GTAYEKQRKDLEAGVDILIGTPGRLIDYFKQRVFDLRAIQAVLLDEADRMFDLGFIKDIR
YLLRRCPPPERRLSMLFSATLSWRVLELAYEHMNNPQKVEVEAEQITADRVRETGYMVAN
EEKIPLLLGLINRLEDARSIVFVNTKREAERVWGYLEGNGHKAAILSGDVPQKKRERLLK
QFADDEVSVLVATDVAARGLHIPGVTHVFNYDLPDDPEDYVHRIGRTARAGAEGDAVAFI
CETYAFSLPDIEDYIGHKIPMKPVTRELLAEVDPASRVHIERKRRPPRGKGSSKGRPRRR
SRDRGPGGGKGGAAG
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgagcgacaagcacctgaccaagacccgtttcgacagcttccccttttctcaggctctt
ctcgacggcatccacgatgccggcttcgagtactgcacgcccatccaggcggccaccctg
ccgctggcgcttgacggccaggacgtggccggccaggcacagaccggcaccggcaagacc
gcggccttcctgctggcgatcctgcacctgctcgaccaggaaccggccgaccagcgccgc
cgcgccaaccagccgcgtgcgctgatcgtggcgccgacccgcgagctggccatccagatc
caccgcgacgccgaggtgctggcgggccacaccggccaccacgtgcgcgtggtctatggc
ggcaccgcctacgagaaacagcgcaaggacctggaggccggggtggacatcctcatcggc
acaccgggccgcctgatcgattacttcaagcaacgggtgttcgacctgcgcgccatccag
gcagtgctactcgacgaggccgaccgcatgttcgacctgggcttcataaaggacatccgc
tacctgttgcggcgctgcccaccgcccgagcgacggctgagcatgctgttctcggccacc
ctctcctggcgcgtcctcgagttggcctacgagcacatgaacaacccgcagaaggtcgag
gttgaggccgagcagatcaccgccgaccgggtgcgcgagaccggctacatggtggccaac
gaggagaagatcccgctgctgctggggctgatcaaccgcctcgaggacgcgcgcagcatc
gtcttcgtcaacaccaagcgcgaggccgagcgtgtctggggctatctggagggcaatggg
cacaaggcggccatcctctcgggcgacgtgccgcagaagaagcgcgaacgcctgctcaag
caatttgccgacgacgaggtctcggtgctggtggccaccgatgtggccgcgcgcggcctg
cacatcccgggcgtgacgcacgtcttcaactatgacctgcccgatgacccggaggactat
gtgcaccgcatcggccgcactgcgcgcgccggcgccgagggcgacgcggtggccttcatc
tgcgagacctatgccttctcactgcccgacatcgaggactacatcggccacaagatcccg
atgaagcctgtcacccgcgagctgctcgccgaggtagatccggccagccgcgtgcacatc
gaacgcaagcgccgccctccacgcggcaaggggagcagcaaggggcggccacgtcgacgc
tcgcgcgaccgcggaccgggtggcggcaaaggcggcgccgccggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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