KEGG T04118: NI40

Enterobacter sp. E20: NI40_003745

Entry

NI40_003745       CDS       T04118

Symbol

pcnB

Name

(GenBank) poly(A) polymerase I

K00970

poly(A) polymerase [EC:2.7.7.19]

Organism

enx Enterobacter sp. E20

Pathway

enx03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:enx00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NI40_003745 (pcnB)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:enx03019]
    NI40_003745 (pcnB)
Enzymes [BR:enx01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     NI40_003745 (pcnB)
Messenger RNA biogenesis [BR:enx03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     NI40_003745 (pcnB)

SSDB

Motif

Pfam:

PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd

Other DBs

NCBI-ProteinID:

ALL16297

Position

complement(804788..806131)

AA seq 447 aa
MANDAIAQPHMSVIPREQHTISRKDISENALKVLYRLNKAGYEAYLVGGGVRDLLLGKKP
KDFDVTTSATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEAGASDRTTSQ
RGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMQDLKEGLIRLIGTP
ETRYREDPVRMLRAVRFAAKLNMRISPETAEPIPRLATLINDVPPARLFEEALKLLQAGH
GFETYNLLREYNLFQPLFPTITRYFTESGDSPMERMIAQVLKNTDTRIRNDMRVNPAFLF
AAMFWYPLLETAQRITQESGLAYYDAFALAANDVLDEGCRTLAIPKRITTLVRDIWQLQL
RMSRRQGKRAWKLMEHPKFRAAFDLLSLRAEIERNQELQRLAQWWAEFQVSAPPEQKDML
TGLDEEPEPRRRHRRPRKRAPRREGTA

NT seq 1344 nt +upstreamnt +downstreamnt
atggcgaacgatgctattgcacagccacacatgtcggttattccgcgtgagcagcacact
atttcccgcaaagatatcagtgaaaatgccctcaaggtgctctatcgtctgaataaagcg
ggctacgaggcctatctcgtgggcggtggagtgcgtgatttactgctgggcaaaaaacca
aaagatttcgacgtgacgaccagcgccacgcctgagcaggtgcgcaaattattccgcaac
tgccgtctcgttggccgccgtttccgtctggctcacgtgatgtttggcccggaaattatc
gaagtggcgaccttccgcggccaccacgaagcgggcgcatccgatcgcaccacgtcacag
cgcggccagaacggcatgctgctgcgcgacaatatcttcggctctatcgaagaagatgcc
cagcgtcgtgacttcaccatcaacagcctttattacagcgtggcggatttcactgtgcgc
gattacgtcggcggcatgcaggacctgaaagaaggtctgatccgtctgatcggcacgccg
gaaacgcgctatcgcgaagatcccgtgcgtatgctgcgcgccgtgcgtttcgccgccaag
ctcaatatgcgcatcagcccggaaacggcagagccgattccgcgcctggcgacgctgatt
aacgacgtgccgcctgcccgcctgtttgaagaggcgctgaagctgctgcaggctggccac
ggctttgaaacctacaacctgctgcgcgaatacaacctgttccagcccctcttcccgacc
attacccgctacttcaccgaaagcggtgacagcccaatggagcggatgattgcgcaggtg
ctgaaaaataccgatacccgtattcgcaacgacatgcgcgtcaatccggcgttcctgttt
gcggcgatgttctggtatccgctgctggaaacggcccagcgaattacccaggagagcggg
cttgcctactatgacgccttcgcgctggccgcaaacgacgtgctggacgaaggatgccgt
acgctcgctattccaaaacgcattaccacgctggtgcgcgatatctggcagcttcagctg
cgcatgtcccgtcgtcagggcaaacgcgcctggaagctgatggagcatccaaaattccgc
gccgccttcgatctgctgtcgctgcgtgctgaaattgaacgcaaccaggagctgcagcgc
ctggcgcagtggtgggccgaattccaggtttccgcaccgccggagcaaaaagatatgctc
accgggctggatgaagagccggaaccgcgtcgccgccatcgccgtccgcgcaaacgcgcg
ccgcgtcgtgaagggacagcatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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