| Entry |
|
|---|
| Name |
ribulose-bisphosphate carboxylase;
D-ribulose 1,5-diphosphate carboxylase;
D-ribulose-1,5-bisphosphate carboxylase;
RuBP carboxylase;
carboxydismutase;
diphosphoribulose carboxylase;
ribulose 1,5-bisphosphate carboxylase;
ribulose 1,5-bisphosphate carboxylase/oxygenase;
ribulose 1,5-diphosphate carboxylase;
ribulose 1,5-diphosphate carboxylase/oxygenase;
ribulose bisphosphate carboxylase/oxygenase;
ribulose diphosphate carboxylase;
ribulose diphosphate carboxylase/oxygenase;
rubisco;
3-phospho-D-glycerate carboxy-lyase (dimerizing) |
|---|
| Class |
Lyases;
Carbon-carbon lyases;
Carboxy-lyases
 |
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| Sysname |
3-phospho-D-glycerate carboxy-lyase (dimerizing;
D-ribulose-1,5-bisphosphate-forming) |
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| Reaction(IUBMB) |
2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 +
H2O [RN:R00024] |
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| Reaction(KEGG) |
R00024;
(other) R03140
 |
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| Substrate |
3-phospho-D-glycerate [CPD:C00197];
H+ [CPD:C00080] |
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| Product |
D-ribulose 1,5-bisphosphate [CPD:C01182];
CO2 [CPD:C00011];
H2O [CPD:C00001] |
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| Cofactor |
Copper [CPD:C00070] |
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| Comment |
Will utilize O2 instead of CO2, forming 3-phospho-D-glycerate and
2-phosphoglycolate. |
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| Pathway |
PATH: ec00630 Glyoxylate and dicarboxylate metabolism
PATH: ec00710 Carbon fixation in photosynthetic organisms
PATH: ec01100 Metabolic pathways |
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| Orthology |
KO: K01601 ribulose-bisphosphate carboxylase large chain
KO: K01602 ribulose-bisphosphate carboxylase small chain |
|---|
| Genes |
ATH: AT1G67090(RBCS1A) AT5G38410 AT5G38420 AT5G38430 ArthCp030(rbcL)
POP: POPTR_578586 POPTR_580797 POPTR_813777 Poptr_cp030(rbcL)
RCU: RCOM_0030020 RCOM_1158790 RCOM_1571640
VVI: 100256536(GSVIVT00031354001) 100267942(GSVIVT00017679001)
4025045(rbcL) 7498516(rbcL)
OSA: 3131463(rbcL) 4324237(Os01g0791600) 4328326(Os02g0152400)
4338862(Os05g0427800) 4341443(Os06g0598500)
4348422(Os10g0356000) 4351758(Os12g0207600)
4351966(Os12g0274700) 4352014(Os12g0291100)
4352015(Os12g0291200) 4352016(Os12g0291400)
4352021(Os12g0292400)
SBI: SORBI_05g003480(SORBIDRAFT_05g003480) SobiCp030(rbcL)
ZMA: 542212(ssu1) 845212(rbcL)
PPP: PHYPADRAFT_115069 PHYPADRAFT_123666 PHYPADRAFT_146969
PHYPADRAFT_151552 PHYPADRAFT_168764 PHYPADRAFT_233894
PHYPADRAFT_87752 PhpapaCp031(rbcL)
CRE: CHLREDRAFT_108283 CHLREDRAFT_82986(RBCS1) ChreCp049(rbcL)
OLU: OSTLU_28400 OSTLU_32608(rbcL) OSTLU_42060 OSTLU_89572
PPF: Pput_1846
MCA: MCA2743(rbcL) MCA2744(cbbS)
TCX: Tcr_0424 Tcr_0427(rbcL) Tcr_0428 Tcr_0838(rbcL) Tcr_0839
NOC: Noc_0332 Noc_0333(rbcL)
AEH: Mlg_1168 Mlg_2836(rbcL) Mlg_2837
HHA: Hhal_0467 Hhal_1045 Hhal_1046(rbcL)
TGR: Tgr7_3202 Tgr7_3203
HNA: Hneap_0921 Hneap_0922 Hneap_1095
CSA: Csal_3215
MMW: Mmwyl1_3120
AFE: Lferr_1388 Lferr_1389(rbcL) Lferr_1814 Lferr_2660(rbcL)
Lferr_2661
AFR: AFE_1690(cbbS-2) AFE_1691(rbcL) AFE_2155(cbbL2) AFE_3051(rbcL)
AFE_3052(cbbS-1)
RMA: Rmag_0701
VOK: COSY_0653(cbbM)
REH: H16_B1394(cbbS2) H16_B1395(rbcL) PHG426(cbbSp) PHG427(rbcL)
RME: Rmet_1500 Rmet_1501(rbcL)
CTI: RALTA_B1701(cbbS) RALTA_B1702(rbcL)
BAC: BamMC406_5257
BXE: Bxe_B0441 Bxe_B2452 Bxe_B2453(rbcL)
BPH: Bphy_6496 Bphy_6497(rbcL)
BPY: Bphyt_7230
BBR: BB1035
RFR: Rfer_1391
POL: Bpro_0032 Bpro_0093
PNA: Pnap_1978
DAC: Daci_5642
VAP: Vapar_1945 Vapar_3031 Vapar_3032
MPT: Mpe_A1478(rbcL) Mpe_A1479(cbbS) Mpe_A2782(rbcL) Mpe_A2783(cbbS)
LCH: Lcho_3767
NEU: NE1920(cbbS) NE1921(rbcL)
NET: Neut_0804(rbcL) Neut_0805
NMU: Nmul_A0685 Nmul_A0686(rbcL)
DAR: Daro_3637
TBD: Tbd_2623(cbbS) Tbd_2624(rbcL) Tbd_2638(cbbM)
APP: CAP2UW1_0825
MLO: mll7006
SME: SM_b20197(cbbS) SM_b20198(rbcL) SM_b20393(rbcL)
SMD: Smed_3724 Smed_3924(rbcL) Smed_3925
ARA: Arad_9230(rbcL)
RET: RHE_PF00042(rbcL)
REC: RHECIAT_PC0000964(rbcL)
RLE: pRL120396(cbbl1)
RLT: Rleg2_4649
RLG: Rleg_4762
RHI: NGR_b22000(rbcL1) NGR_c06470(rbcL2)
OAN: Oant_3067 Oant_4835
BJA: blr2585(rbcL) blr2586(cbbS)
BRA: BRADO1659(rbcL) BRADO1660(cbbS) BRADO2274(rbcL) BRADO2275(cbbS)
BBT: BBta_0451(rbcL) BBta_0452(cbbS) BBta_2641(rbcL) BBta_2642(cbbS)
BBta_6396(cbbS) BBta_6397(rbcL)
RPA: RPA0262(rlp2) RPA1559(rbcL) RPA1560(cbbS) RPA2169(rlp1)
RPA4641(cbbM)
RPB: RPB_0300 RPB_0951 RPB_3227 RPB_3963 RPB_3964(rbcL)
RPC: RPC_0252 RPC_1327(rbcL) RPC_1328 RPC_2895
RPD: RPD_0462 RPD_1054 RPD_1548 RPD_1549(rbcL) RPD_3721
RPD_3722(rbcL)
RPE: RPE_0422 RPE_1361(rbcL) RPE_1362 RPE_2686 RPE_3678
RPT: Rpal_0263 Rpal_1747(rbcL) Rpal_1748 Rpal_2462 Rpal_5122
NWI: Nwi_1986 Nwi_1987(rbcL) Nwi_2928 Nwi_2929(rbcL)
NHA: Nham_3750 Nham_3751(rbcL) Nham_4049(rbcL) Nham_4050
Nham_4332(rbcL) Nham_4333
XAU: Xaut_1917 Xaut_1918(rbcL) Xaut_2924
AZC: AZC_2687
MET: M446_1732
MNO: Mnod_2420 Mnod_3435
MSL: Msil_1195(rbcL) Msil_1196 Msil_1244
RSP: RSP_1281(cbbS) RSP_1282(rbcL) RSP_3271(rbpL)
RSH: Rsph17029_2940 Rsph17029_2941(rbcL) Rsph17029_4004
RSQ: Rsph17025_2711 Rsph17025_2712(rbcL) Rsph17025_4020
Rsph17025_4063(rbcL) Rsph17025_4064
RSK: RSKD131_2680 RSKD131_2681 RSKD131_3446 RSKD131_4141
JAN: Jann_3063
PDE: Pden_1699(rbcL) Pden_1700
ACR: Acry_0824(rbcL) Acry_0825 Acry_1067
RRU: Rru_A1998 Rru_A2400
RCE: RC1_0239(rbcL) RC1_0240(ccbS2) RC1_4061(rbcL) RC1_4062(cbbS1)
MAG: amb2696
GYM: GYMC10_2998
VPR: Vpar_1263
ADG: Adeg_1863
AAU: AAur_1905
ACH: Achl_1739
TCU: Tcur_1655 Tcur_1656
AFO: Afer_0119 Afer_0120
RMR: Rmar_1894
DFE: Dfer_2138
PHE: Phep_2747
MIN: Minf_1263(rbcS) Minf_1264(rbcL)
SYN: slr0009(rbcL) slr0012(rbcS)
SYW: SYNW1717(rbcS) SYNW1718(rbcL)
SYC: syc0129_c(rbcS) syc0130_c(rbcL)
SYF: Synpcc7942_1426(rbcL) Synpcc7942_1427
SYD: Syncc9605_0752(rbcL) Syncc9605_0753
SYE: Syncc9902_1613 Syncc9902_1614(rbcL)
SYG: sync_1966(cbbS) sync_1967(rbcL)
SYR: SynRCC307_0819(rbcL) SynRCC307_0820(rbcS)
SYX: SynWH7803_0678(rbcL) SynWH7803_0679(rbcS)
SYP: SYNPCC7002_A1796(rbcS) SYNPCC7002_A1798(rbcL)
CYA: CYA_1194(rbcL) CYA_1196(cbbS)
CYB: CYB_2577(cbbS) CYB_2579(rbcL)
TEL: tll1504(rbcS) tll1506(rbcL)
MAR: MAE_47870(rbcS) MAE_47890(rbcL)
CYT: cce_3164(rbcS) cce_3166(rbcL)
CYP: PCC8801_1602(rbcL) PCC8801_1604
CYC: PCC7424_1365 PCC7424_1367(rbcL)
CYN: Cyan7425_3420 Cyan7425_3422
CYH: Cyan8802_1628 Cyan8802_1630
GVI: gvip295(rbcL) gvip297(rbcS)
ANA: alr1524(rbcL) alr1526(rbcS)
NPU: Npun_F4195(rbcL) Npun_F4197
AVA: Ava_3903 Ava_3905 Ava_3907(rbcL)
PMA: Pro0551(rbcL) Pro0552(rbcS)
PMM: PMM0550(rbcL) PMM0551(rbcS)
PMT: PMT1204(rbcS) PMT1205(rbcL)
PMN: PMN2A_1879(rbcL) PMN2A_1880
PMI: PMT9312_0550(rbcL) PMT9312_0551
PMB: A9601_06061(rbcL) A9601_06071(rbcS)
PMC: P9515_06141(rbcL) P9515_06151(rbcS)
PMF: P9303_08081(rbcL) P9303_08091(rbcS)
PMG: P9301_05761(rbcL) P9301_05771(rbcS)
PMH: P9215_06311(rbcL) P9215_06321(rbcS)
PMJ: P9211_05521(rbcL) P9211_05531(rbcS)
PME: NATL1_06041(rbcL) NATL1_06051(rbcS)
TER: Tery_4408 Tery_4410(rbcL)
AMR: AM1_1783(rbcS) AM1_1785(rbcL)
CTE: CT1772(rbcL)
CPC: Cpar_0434
CCH: Cag_1640
CPH: Cpha266_2001
CPB: Cphamn1_2007
CLI: Clim_1970
PVI: Cvib_0464
PLT: Plut_0412
PPH: Ppha_2334
PAA: Paes_1801
CTS: Ctha_1707
TRO: trd_0132
PMX: PERMA_0408
TLE: Tlet_1684
MJA: MJ1235(rbcL)
MFE: Mefer_1318
MVU: Metvu_0984
MAC: MA4555(rbcL)
MBA: Mbar_A0902(rbcL)
MMA: MM_1249(rbcL)
MBU: Mbur_2322
MTP: Mthe_1616
MHU: Mhun_2315
MLA: Mlab_0558
MEM: Memar_1325(rbcL)
MBN: Mboo_1105(rbcL)
MPL: Mpal_0258
MPD: MCP_1116(rbcL)
AFU: AF1638(rbcL)
NPH: NP2770A(rbcL)
HMU: Hmuk_2766
PHO: PH0939(rbcL)
PAB: PAB1580(rbcL)
PFU: PF1156(rbcL)
TKO: TK2290(rbcL)
TON: TON_1234(rbcL)
TGA: TGAM_1751(rbcL)
TSI: TSIB_1596
RCI: RCIX222(rbcL)
SMR: Smar_1051(rbcL)
DKA: DKAM_1140(rbcL)
HBU: Hbut_0503(rbcL)
TPE: Tpen_1227(rbcL)
 |
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| Structures |
PDB: 1AA1 1AUS 1BWV 1BXN 1EJ7 1GEH 1GK8 1IR1 1IR2 1IWA
1RBA 1RBL 1RBO 1RCO 1RCX 1RLC 1RLD 1RSC 1RUS 1RXO
1SVD 1UPM 1UPP 1UW9 1UWA 1UZD 1UZH 1WDD 2CWX 2CXE
2D69 2RUS 2V63 2V67 2V68 2V69 2V6A 2VDH 2VDI 2WVW
3RUB 4RUB 5RUB 8RUC 9RUB |
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Reference
Authors
Title
Journal
Organism
|
1 [PMID:4331471]
Bowes G, Ogren WL, Hageman RH.
Phosphoglycolate production catalyzed by ribulose diphosphate
carboxylase.
Biochem. Biophys. Res. Commun. 45 (1971) 716-22.
Zea mays [GN:zma], Glycine max |
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Reference
Authors
Title
Journal
Organism
|
2 [PMID:4310607]
Wishnick M, Lane MD, Scrutton MC, Mildvan AS.
The presence of tightly bound copper in ribulose diphosphate
carboxylase from spinach.
J. Biol. Chem. 244 (1969) 5761-3.
Spinacia oleracea |
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| Other DBs |
ExplorEnz - The Enzyme Database: 4.1.1.39
IUBMB Enzyme Nomenclature: 4.1.1.39
ExPASy - ENZYME nomenclature database: 4.1.1.39
BRENDA, the Enzyme Database: 4.1.1.39
CAS: 9027-23-0 |
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