KEGG   Escherichia coli O103 H2 12009 (EHEC): ECO103_4593
Entry
ECO103_4593       CDS       T01096                                 
Symbol
priA
Name
(GenBank) primosome factor n'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
eoh  Escherichia coli O103:H2 12009 (EHEC)
Pathway
eoh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:eoh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    ECO103_4593 (priA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eoh03400]
    ECO103_4593 (priA)
Enzymes [BR:eoh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ECO103_4593 (priA)
DNA repair and recombination proteins [BR:eoh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     ECO103_4593 (priA)
SSDB
Motif
Pfam: PriA-like_WH PriA_3primeBD DEAD PriA_C ResIII Helicase_C PriA_CRR AAA_30 zinc-ribbons_6 AAA_19 AAA_22 TrwB_AAD_bind CEP104_ZnF
Other DBs
NCBI-ProteinID: BAI33289
Position
4722601..4724799
AA seq 732 aa
MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNEL
KAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA
TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET
PEFSDWQTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQANNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQQHLRCHHCDSQRPVPRQCPSCG
STHLVPVGLGTEQLEQTLAPLFPDVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI
LSSPLADDKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIISGTLALINTIPDSRK
VKWVLDVDPIEG
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgcccgttgcccacgttgccttgcccgttccgcttcctcgtacctttgactatctgctg
ccagaaggcatgacggttaaagccgggtgtcgcgtgcgcgtgccgtttggcaaacagcag
gagcgcatcggggttgtggtgtcagttagcgatgtcagtgagctgccgcttaacgagctg
aaagcggtagtggaagtgctggacgttgagccggtatttactcactccgtctggcggtta
ctgctctgggcggcagattactatcatcatccgattggcgatgtgctgtttcatgccttg
ccgattttactgcgccaggggcggcctgcggcgaacgcgccgatgtggtactggtttgcc
actgaacaaggccaggcggtggatctgaacagcctgaaacgctcccccaagcaacaacag
gcgctggcggcgttacggcaaggcaaaatctggcgcgaccaggtcgccacgctcgaattt
aatgatgccgcgttgcaggcgctacgcaaaaaaggtctgtgtgatttagcaagtgaaaca
ccagagtttagcgactggcaaacgaactatgccgtttctggtgagcggttgcgattgaat
accgaacaggccaccgccgttggcgcaattcatagcgcggcagatactttttctgcctgg
ctgctggcgggcgttaccggttccggtaaaacggaggtttatctcagtgtactggaaaac
gtgctcgctcagggcaaacaggcgctggtgatggtgccggaaatcggcctgacaccgcaa
actatcgcccgttttcgtgaacgttttaatgcccccgtggaagttctgcattccggcctg
aacgacagcgagcggctttcggcgtggttgaaagcgaaaaatggcgaggcggcgattgtg
atcggcacccgctccgcgctgtttacgccgtttaaaaatctcggcgtgattgtcattgat
gaagagcacgacagctcctacaagcagcaggaaggctggcgctatcatgcccgcgacctg
gcggtgtatcgtgcgcatagcgagcaaatcccgattattcttggctccgcaacgcccgcg
ctggaaacgttgtgcaacgtccagcagaaaaaataccgcctgctgcgcctgacgcgccgg
gcggggaatgcgcgtccggcaattcaacacgtgctggatttaaaaggtcagaaggtgcag
gcaggtctggctccggcgttaatcacccgtatgcgccagcatttacaggccaacaatcag
gttatcctctttcttaatcgtcggggttttgcgcctgcgctactgtgccacgactgcggc
tggattgccgaatgcccacgttgcgatcactactacacgctgcatcaggcgcaacagcat
ttgcgctgtcaccactgtgacagtcagcgtccggtgccgcgccagtgcccttcctgcggt
tccacgcacctggtacccgtggggctgggcaccgaacagcttgaacagacgcttgcgccg
ctgttccctgatgtgcccatttctcgtatcgaccgcgataccaccagccgcaaaggggcg
ctggaacagcaactggcggaagtacatcgcggcggtgcgaggattttgatcggcacacaa
atgctggcgaaaggtcaccactttccggatgtgacgctggtggcgttactggatgtggac
ggcgcgctgttttctgccgattttcgctcggcagagcgtttcgctcagctttacacccag
gtcgctggtcgtgccgggcgtgcgggtaaacaaggcgaagtggtgctgcaaacgcaccat
ccagaacatcctctgttgcaaacgttgctctataaaggctacgacgcctttgccgaacag
gcgctggctgagcgacggatgatgcaactgccgccatggaccagccatgtgattgtgcgt
gcggaagatcataacaatcagcatgcgccgctgttcctgcaacaactgcgtaatctgatc
ctctccagcccgctggcagacgacaaactgtgggttctcggtccggttccggcactggca
cctaaacgtggcggtcgctggcgctggcagatattgttgcagcacccttcccgcgtgcgc
ttgcaacacatcattagtggtacgctggcgctcatcaatacaataccggattcccgcaag
gtgaaatgggtactggatgttgatccgattgagggttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (22)   

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