KEGG   Escherichia coli O111 H- 11128 (EHEC): ECO111_0212
Entry
ECO111_0212       CDS       T01097                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit DnaQ
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
eoi  Escherichia coli O111:H- 11128 (EHEC)
Pathway
eoi03030  DNA replication
eoi03430  Mismatch repair
eoi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:eoi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ECO111_0212 (dnaQ)
   03430 Mismatch repair
    ECO111_0212 (dnaQ)
   03440 Homologous recombination
    ECO111_0212 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:eoi03032]
    ECO111_0212 (dnaQ)
   03400 DNA repair and recombination proteins [BR:eoi03400]
    ECO111_0212 (dnaQ)
Enzymes [BR:eoi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ECO111_0212 (dnaQ)
DNA replication proteins [BR:eoi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ECO111_0212 (dnaQ)
DNA repair and recombination proteins [BR:eoi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ECO111_0212 (dnaQ)
SSDB
Motif
Pfam: RNase_T DUF5817 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: BAI34209
Position
237727..238458
AA seq 243 aa
MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDP
EAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPK
TNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLAMTG
GQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFATDEELAAHEARLDLVEKKGGSCL
WRA
NT seq 732 nt   +upstreamnt  +downstreamnt
atgagcactgcaattacacgccagatcgttctcgataccgaaaccaccggtatgaaccag
attggtgcgcactatgaaggccacaagatcattgagattggtgccgttgaagtggtgaac
cgtcgcctgacgggcaataacttccatgtttatctcaaacccgatcggctggtggatccg
gaagcctttggcgtacatggtattgccgatgaatttttgctcgataagcccacgtttgcc
gaagtagccgatgagttcatggactatatccgcggcgcggagttggtgatccataacgca
gcgttcgatatcggctttatggactacgagttttcgttgcttaagcgcgatattccgaag
accaataccttctgtaaggtcaccgatagccttgcggtggcgaggaaaatgtttcctggt
aagcgcaacagcctcgatgcgttatgtgcccgctacgaaatagataacagtaaacgaacg
ctacacggggcattactcgatgcacagatccttgcggaagtttatctggcgatgaccggt
ggtcaaacgtcgatggcttttgcgatggaaggagagacacagcagcaacaaggtgaagca
acaattcagcgcattgtacgtcaggcaagtaagttacgcgttgtttttgcgacagatgaa
gagcttgcagctcatgaagcccgtcttgatctggtggagaagaagggcggaagctgcctc
tggcgggcataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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