KEGG T01098: ECO26

Escherichia coli O26 H11 11368 (EHEC): ECO26_1094

Entry

ECO26_1094        CDS       T01098

Symbol

yccW

Name

(GenBank) predicted methyltransferase

K06969

23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]

Organism

eoj Escherichia coli O26:H11 11368 (EHEC)

Brite

KEGG Orthology (KO) [BR:eoj00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:eoj03009]
    ECO26_1094 (yccW)
Enzymes [BR:eoj01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.191  23S rRNA (cytosine1962-C5)-methyltransferase
     ECO26_1094 (yccW)
Ribosome biogenesis [BR:eoj03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    ECO26_1094 (yccW)

SSDB

Motif

Pfam:

Methyltrans_SAM PUA_3 Cons_hypoth95 Methyltransf_31 MTS Met_10 Methyltransf_15 Methyltransf_25 Methyltransf_11 PrmA PUA TRM Methyltransf_10 Methyltransf_12 Spermine_synth Methyltr_RsmB-F

Other DBs

NCBI-ProteinID:

BAI24410

Position

complement(1168129..1169319)

AA seq 396 aa
MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQ
IRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRF
GNFLVLQLLSAGAEYQRAALVSALQTLYPECAIYDRSDVAVRKKEGMELTQGLVTGELPP
ALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALM
GGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEIFDVIVMD
PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDA
GRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM

NT seq 1191 nt +upstreamnt +downstreamnt
atgagtgtacgtttagtgttagccaaagggcgcgaaaaatcattacttcgtcgccatccg
tgggtcttttccggggccgttgcccgcatggaaggtaaagccagcctcggtgaaaccatc
gatattgttgatcatcagggaaaatggttagcacgcggcgcttattcaccagcttcgcaa
atccgggcgcgcgtctggacgtttgacccgtctgagtctatcgacattgcttttttttcc
cgccgtttgcaacaagcacaaaaatggcgtgactggctggcgcaaaaagatggcctcgac
agctatcgtttaatcgccggagaatctgatggcctgccgggtattactatcgatcgtttc
ggtaattttctggtgctgcaactgctgagtgctggggcagaatatcagcgcgcggcatta
gttagtgccctgcaaacgctgtacccggaatgtgcgatttacgatcgcagcgatgttgcg
gtacgtaaaaaagaagggatggagctgacccagggcctcgtcaccggcgagttgccgcct
gccctgctgccgattgaagaacacggcatgaagctgctggtggatattcagcacggacac
aaaacgggctactacctggaccagcgtgatagccgcctggctacccgccgctacgttgaa
aataaacgtgtgctgaactgtttctcctataccggtggtttcgccgtatcggcactgatg
ggcggttgcagccaggttgtcagcgttgatacctcccaggaagcgctggatattgcacgg
cagaacgttgagctgaacaaactggatctgagcaaggctgagtttgtccgtgatgatgtc
tttaaattgctgcgtacttatcgcgatcgcggtgaaatatttgacgttatcgtgatggac
ccgccgaagtttgttgagaataaaagccagttgatgggcgcgtgtcgtggctataaagat
atcaacatgctggcgattcagttgctgaatgaaggcggtattctcctgactttctcctgt
tccggtctgatgaccagcgatttatttcagaaaatcatcgcggatgccgcaattgatgcc
ggccgtgatgtacaatttatagagcagttccgtcaggcagccgatcatccggtgatcgct
acctatccggaagggctatatctgaaagggtttgcctgtcgcgtcatgtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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