KEGG T01098: ECO26

Escherichia coli O26 H11 11368 (EHEC): ECO26_2921

Entry

ECO26_2921 CDS T01098

Gene name

sbcB

Definition

exonuclease I

Orthology

K01141

exodeoxyribonuclease I [EC:3.1.11.1]

Organism

eoj Escherichia coli O26:H11 11368 (EHEC)

Pathway

eoj03430

Mismatch repair

Class

Genetic Information Processing; Replication and repair; Mismatch repair [PATH:eoj03430]

SSDB

Motif

Pfam:

Exonuc_X-T_C RNase_T

Other DBs

NCBI-GI:

260855993

NCBI-GeneID:

8480801

UniProt:

C8TTU4

Position

2836583..2838010

AA seq 475 aa
MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDDEFNVIGEPEVFYCKPADDYLPQ
PGAVLITGITPQETRAKGENEAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNVFYRNF
YDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHSNA
HDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSGMFGAWR
GNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDTAAVPVKL
VHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKILRENPQVREKVVAIFVEAEPFTPS
DNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLD
YAEQQRWLEHRRQVFTPEFLQGYAEEIQMLAQQYADDKEKVALLKALWQYAEEIV

NT seq 1428 nt +upstreamnt +downstreamnt
atgatgaatgacggtaagcaacaatctacctttttgtttcacgattacgaaacctttggc
acgcaccccgcgttagatcgccctgcacagttcgcagccattcgcaccgatgacgaattc
aatgtcatcggcgaacccgaagtcttttactgcaagcccgcggatgactatttaccccag
cctggagcagtattaattaccggtattaccccgcaggagacacgagcgaaaggagaaaac
gaagccgcgtttgccgcccgtattcactcgctttttaccgtaccgaagacctgtattctg
ggctacaacaatgtgcgtttcgacgacgaagtcacacgcaacgttttttatcgtaatttc
tacgatccttacgcctggagctggcagcatgataactcgcgctgggatttactggatgtt
atgcgtgcctgttatgccctgcgcccggaaggaataaattggcctgaaaatgatgacggt
ctaccgagctttcgccttgagcatttaaccaaagcgaatggtattgaacatagcaacgcc
cacgatgcgatggctgatgtgtacgccactattgcgatggcaaaactggtaaaaacgcgt
cagccacgcctgtttgattatctctttacccatcgtaataaacacaaactaatggcgttg
attgatgttcctcagatgaaacccctggttcacgtttccggaatgtttggtgcatggcgc
ggcaatacaagctgggtggcaccgctggcgtggcatcctgaaaatcgcaatgccgtaatt
atggtggatttggcaggagacatttcgccattactggagctggatagcgacacattgcgc
gagcgtttatataccgcaaaagccgatcttggcgataccgccgccgttccggttaagctg
gtacatatcaataaatgtccggtactggcccaggcgaatacgctacgcccggaagatgcc
gaccgactgggaattaatcgtcagcattgcctcgataacctaaaaattctgcgtgaaaat
ccgcaagtgcgtgaaaaagtggtagcgatattcgtggaagccgaaccgtttacaccttca
gataatgtggatgcacagctttataacggctttttcagtgacgccgatcgtgcagcaatg
aaaattgtgctggaaaccgagccgcgtaatttaccggcactggatatcacttttgttgat
aaacgaattgaaaagctgttgttcaattatcgggcgcgcaacttcccggggacgctggat
tatgccgagcagcaacgctggctggagcaccgccgccaggtcttcacgccagagttttta
caaggctatgcagaagagattcagatgctggcgcagcagtatgccgacgataaagaaaaa
gtggcgctgttaaaagcgctttggcagtacgcggaagagattgtctaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF

DBGET integrated database retrieval system