| Entry |
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| Gene name |
holD
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| Definition |
(GenBank) DNA polymerase III, psi subunit
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| KO |
| DNA polymerase III subunit psi [EC: 2.7.7.7] |
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| Organism |
eoj Escherichia coli O26:H11 11368 (EHEC)
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| Pathway |
| Purine metabolism | | Pyrimidine metabolism | | Metabolic pathways | | DNA replication | | Mismatch repair | | Homologous recombination |
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| Module |
| DNA polymerase III complex, bacteria |
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| Brite |
KEGG Orthology (KO) [BR:eoj00001]
Metabolism
Nucleotide metabolism
00230 Purine metabolism
ECO26_5577 (holD)
00240 Pyrimidine metabolism
ECO26_5577 (holD)
Genetic Information Processing
Replication and repair
03030 DNA replication
ECO26_5577 (holD)
03430 Mismatch repair
ECO26_5577 (holD)
03440 Homologous recombination
ECO26_5577 (holD)
Enzymes [BR:eoj01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ECO26_5577 (holD)
DNA replication proteins [BR:eoj03032]
Prokaryotic Type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ECO26_5577 (holD)
DNA repair and recombination proteins [BR:eoj03400]
Prokaryotic Type
SSBR (single strand breaks repair)
MMR (mismatch exicision repair)
DNA polymerase III holoenzyme
ECO26_5577 (holD)
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| SSDB |
    |
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| Motif |
 |
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| Other DBs |
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| Structure |
PDB: |
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| Position |
5664365..5664778
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| AA seq |
137 aa  
MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRA
LTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAA
LWQQICTYEHDFFPRND |
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| NT seq |
414 nt  +upstreamnt +downstreamnt
atgacatcccgacgagactggcagttacagcaactgggcattacccagtggtcgctgcgt
cgccctggcgcgttgcagggggaaattgccattgcgatcccggcacacgtccgtctggtg
atggtggcaaacgatcttcccgccctgactgatcctttagtgagcgatgttctgcgcgca
ttaaccgtcagccccgatcaagtgctgcaactgacgccagaaaaaatcgcgatgctgccg
caaggcagtcgctgcaacagctggcggttgggtactgacgaaccgctatcactggaaggc
gctcaggtggcatcaccggcgctcaccgatttacgggcaaacccaacggcacgcgccgcg
ttatggcaacaaatttgcacatatgaacacgatttcttccctcgaaacgactga |
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