KEGG   Emticicia oligotrophica: Emtol_2427
Entry
Emtol_2427        CDS       T02272                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
eol  Emticicia oligotrophica
Pathway
eol03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eol00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Emtol_2427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eol03019]
    Emtol_2427
Messenger RNA biogenesis [BR:eol03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Emtol_2427
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 UTP25 PhoH
Other DBs
NCBI-ProteinID: AFK03563
Position
complement(2514433..2515779)
AA seq 448 aa
MTFNELNLNKQLINALDDLGYTTPTTIQQKVFSVVMSGKDVCGIAQTGTGKTFAYLLPSL
RQYQFSKEKMPQVLIIVPTRELVVQVVESIQKITTYMSVITVGVYGGVNIKPQILDIQNG
VDILVGTPGRLIDLLSSGFIKTKSLKKLIIDEVDEMLNLGFRPQLKNILDLLPARRQNLL
FSATITEEVEQIIETYFNEPMRVEAAPAGSPLENISQTLYHVPNFNTKVNLLELLLMDDD
SMSKVLIFAATKELADQLYNRIERKYGEKVGIIHSNKAQNTRFNTVKAFQEGSCKMLIAT
DIIARGIDIAEVSHVINFDIPEVPENYIHRIGRTGRVDKKGIAITFMTPKEIEQIDAIEE
MMNYEIPVAELPENLTISDVLTEAEMPQVKMKNVLVKAPKREDVGPAFHEKLAKNKKVNV
RRDIKAEKWAKYGRPIKKSGNKPKRGDR
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgactttcaacgaattaaatctcaataaacaactcatcaatgccctcgacgacttgggc
tatacaacgccaactaccattcagcagaaagttttctcggtggtaatgtcgggtaaagat
gtttgcggaattgcccaaactggaacaggaaaaacttttgcttatttattgccaagttta
cgccaatatcagttttcgaaagaaaaaatgcctcaagtactcatcattgttcctacacgt
gagctggtagtacaggtggtagaatctattcagaaaattacaacctacatgagtgtcata
accgtgggtgtgtatggtggggtaaacatcaagcctcaaattttagacattcagaatgga
gtagatattttggtaggaacacctggccgtttgattgatttgctttcgagtggttttatt
aaaaccaaatctctcaaaaaactaatcattgatgaagtagatgaaatgctcaatctgggt
tttcgtcctcaactcaaaaacattcttgatttattgccagctcgccgccaaaatttgctt
ttttcggctacaattaccgaagaagttgagcaaatcattgaaacatacttcaacgaacct
atgagagtagaagctgcaccagcgggttcgccattagagaatatttcgcagacgctctac
catgtaccaaatttcaatacaaaagtaaatttactcgaattgcttttaatggacgacgac
agcatgagtaaagtattaatttttgcagcaaccaaggaattagccgaccaactttataac
cgaattgaaagaaaatacggcgaaaaagtaggcattattcactcaaataaagcacaaaat
acgcgtttcaacaccgtaaaagcttttcaagaaggaagttgtaaaatgctcattgccacc
gatatcattgctcgtggtatagatatcgctgaggtttcgcacgttattaattttgatatt
cctgaagtgcccgaaaactacattcaccgcatcggtcgtacggggcgtgtcgataaaaaa
ggtatcgccatcactttcatgactccaaaagaaattgagcaaattgatgccattgaggag
atgatgaactacgaaattcctgtagctgaattacccgaaaacctcacaatttcagatgta
ttgaccgaagccgaaatgccacaggtaaagatgaaaaatgtgttggtaaaggccccaaaa
cgagaagatgttggtccggcttttcatgaaaaactggccaaaaataaaaaagtgaatgta
agacgcgatattaaggccgaaaaatgggcaaaatatggccgacctattaaaaaatctggc
aataaacctaaacgtggcgatagataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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