KEGG   Emticicia oligotrophica: Emtol_4100
Entry
Emtol_4100        CDS       T02272                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
eol  Emticicia oligotrophica
Pathway
eol03030  DNA replication
eol03410  Base excision repair
eol03420  Nucleotide excision repair
eol03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:eol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Emtol_4100
   03410 Base excision repair
    Emtol_4100
   03420 Nucleotide excision repair
    Emtol_4100
   03440 Homologous recombination
    Emtol_4100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:eol03032]
    Emtol_4100
   03400 DNA repair and recombination proteins [BR:eol03400]
    Emtol_4100
Enzymes [BR:eol01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Emtol_4100
DNA replication proteins [BR:eol03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Emtol_4100
DNA repair and recombination proteins [BR:eol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Emtol_4100
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Emtol_4100
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_2 HHH_5 HHH
Other DBs
NCBI-ProteinID: AFK05225
Position
complement(4537802..4540684)
AA seq 960 aa
MPTKKLFLLDAMALIYRAHFAFMKAPRLTSTGLNTSCVFGVANAILEVIQKEKPTHIGVA
FDLPGGTFRNDWFPEYKANRQEQPEDITIAIPYVKKLVEAMDIPLLMLAGYEADDVIGTL
AKQAAKHDFEVFMMTPDKDYGQLVEDHIYIYKPAIGGKDAEKLGVKEVCEKWGIEHPEQV
VDILGLMGDAVDNIPGVPGVGEKTAAKLIATYGSIENMYENADKLTGKVGEAIKNNKEQA
LLSKKLAQIELNVPVEFNEDFLKITHPKPELMGPLLDELEFRTLRKRLLPNEPVPASSSG
DSSQKSNPSTAPVNALKAKSGTQISMFEAMGAPAAPQIAAQTPFEEEEELQYRANSVKDT
ILSKVHEYHLMDTPILRKSLIQYLSNQEEFCFDSETTSVDAVDAEVVGLSFAYYAGEAFY
VPIPSEKEEAQAVMNEFKEVFENESIIKIGQNIKYDLMVLKNYGIELKGTLFDTMLAHYI
IEPEQRHGMDYLANIYLNYEPVSIETLIGKGKSQGSMRDVALEKIKDYAAEDADITFQLK
HILAPKLADSQQQKLLQQVEMPLVKVLADMEMEGVRVDESALQEMSSVLESDVRQIQSDI
FNIAGQEFNVASPKQLGEILFEKLKLDKNAKKTKTGQYATGEDILSKLENEHEIVRKILD
FRELVKLKNTYVDALPALISKKTGRIHTSYNQAVAATGRLSSTNPNLQNIPIRTPRGREI
RKAFVPRNDEYVILSADYSQIELRIMAAFSGDESMLEAFNQGIDIHSTTASKVFRVGLSD
VTSDMRRKAKMVNFGIIYGISAFGLSQRLNIPRGEAKEIIDAYWVEFPKIKQFMDDTINK
AREVKYAETILGRRRYLRDINSQNMTDRGFAERNAINAPIQGSAADMIKVAMINIHDFMK
KEQLQSRMILQVHDELVFDAHRSEVDFLKTKVDELMCTAIPLTVKMETGMGIGQNWLEAH
NT seq 2883 nt   +upstreamnt  +downstreamnt
atgcccactaaaaaactttttttgttagatgccatggctctcatttacagagctcacttt
gctttcatgaaagcccctcgcctaacatccacaggactgaacacaagctgtgtttttggg
gtagctaatgccatcttagaagttattcaaaaagaaaaaccaacgcatatcggtgttgcc
tttgatttgcccggtggaacctttagaaatgattggtttccagaatacaaagctaatcgt
caagaacaaccagaagatataacgattgctattccttatgtcaaaaagttagttgaagca
atggatattcctttgcttatgcttgcaggctacgaagctgatgacgtaattggaacactt
gccaaacaagcagccaaacacgattttgaggtctttatgatgacccccgataaagattac
gggcaattagtagaagaccatatttatatatacaaacccgcgattggcggaaaagatgcc
gagaaattaggtgtaaaagaagtttgtgaaaagtggggaatcgaacacccagagcaagtt
gtagatattcttggtttgatgggggatgcagttgataacattccgggagtaccaggagtt
ggagaaaaaactgcagcgaagctaattgctacttatggctcaatcgaaaatatgtatgaa
aatgctgataaacttactgggaaagttggtgaagccatcaaaaacaataaagaacaagca
cttttatcgaaaaagttagcccaaattgaacttaatgttccagttgaattcaatgaagat
ttcctaaaaataactcaccccaaacctgaattaatgggtcctcttttggatgaattagag
tttcgtaccttgcgtaaacgcttattaccaaacgagccagttcctgcatcttcctcgggt
gattcaagtcaaaagtctaatccaagcactgcccctgtcaatgcattaaaagcaaaatca
ggtacgcaaatttcgatgttcgaagcaatgggtgcaccagcggcacctcaaatcgctgct
caaactccttttgaggaagaggaagaacttcaatatagagctaattccgtaaaggatacc
attttaagcaaagttcatgagtatcaccttatggatacacctattttgagaaaaagttta
attcaatatttaagtaatcaagaagaattttgcttcgattctgaaactacttctgttgat
gccgtagatgcagaagttgttggattatcgtttgcttattatgctggtgaagcattttat
gttccgattccaagtgaaaaagaagaagctcaagcagtgatgaatgagtttaaggaagta
tttgaaaatgagtcaattattaaaattggacaaaatatcaaatacgatttgatggttttg
aaaaattatggaatcgaactgaaaggtacgttatttgataccatgttggctcattatatc
atcgaacccgaacaacgccacggcatggattatttggctaatatctacttaaactatgag
cctgtttctatcgaaacccttattggtaaaggaaaatctcaaggtagtatgcgtgatgta
gctttagaaaaaattaaagattatgccgcagaagatgcagatattacctttcaattaaag
cacattctggctcctaaattggccgattctcaacagcaaaagcttcttcagcaagtagaa
atgccattggttaaggtattagccgatatggaaatggaaggtgtaagagttgatgagtca
gcacttcaagaaatgtctagtgttcttgaaagtgatgttcgtcaaattcaatccgatatt
ttcaatattgctggacaggaatttaatgtagcttctccaaaacaattaggggaaattctt
tttgaaaaactcaaattagataaaaacgctaaaaaaactaaaacgggtcaatatgctact
ggcgaggatatcctttcgaaattagaaaacgaacacgaaattgttcgtaaaatcctagat
ttcagagagttagtaaaattaaaaaacacttacgttgacgccctcccagccttgatttca
aaaaagactggtagaatacatacctcttataatcaagcagttgcggctacggggcgtttg
agttcaacgaatccaaatttgcaaaacattccgattcgaacaccaagaggccgtgaaatc
agaaaggcttttgtgccacgcaatgatgagtatgttattctttctgccgattattctcaa
attgaattacgtatcatggcagctttcagtggcgatgaaagtatgctcgaggcattcaac
caagggattgatattcactcaacaacagcgtcaaaagtattcagagtgggcctttctgat
gtaacatctgatatgcgtagaaaggccaaaatggtcaattttggcattatttatggaatt
tcggcttttggcttatcgcaaaggctcaatattccccgtggtgaagctaaagaaattatt
gatgcttactgggttgaatttccaaaaatcaaacaatttatggatgataccatcaataaa
gctcgtgaagtgaaatatgccgaaactattttaggtcgtcgtagatatttacgagatatc
aattcacagaacatgaccgaccgaggttttgccgaacgtaatgccatcaatgctccaatt
caaggttcggccgccgatatgattaaagttgctatgataaatattcatgattttatgaaa
aaagagcaactacaatcacgtatgattttacaagtacatgatgaacttgtatttgatgcc
catcgttcggaagtcgatttccttaaaacgaaagttgatgaattaatgtgcacggccatt
ccgcttactgtaaagatggaaacaggcatgggaattggtcaaaattggcttgaagctcac
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (58)   

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