KEGG   Exaiptasia diaphana (Aiptasia): 110251923
Entry
110251923         CDS       T05080                                 
Name
(RefSeq) DNA mismatch repair protein Msh3
  KO
K08736  DNA mismatch repair protein MSH3
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:epa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    110251923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:epa03400]
    110251923
DNA repair and recombination proteins [BR:epa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     110251923
SSDB
Motif
Pfam: MutS_V MutS_I MutS_III MutS_II MutS_IV
Other DBs
NCBI-GeneID: 110251923
NCBI-ProteinID: XP_028518876
Position
Unknown
AA seq 967 aa
MTKLKXFERDSQYFTRKDSKSAEYSNTNTEDDTSDCIIMHDXRMEKSEEKTNFSCFRRNT
MSDSKEKSSSIAKNPRTKTQYTPLELQFIEIKEKYKDAVLFVECGYKYKFFGEDAEIASK
ELNIMCFMDHNFMVASIPTHRLHVHVKRLVNKGYKVGVVKQTETAALKAASDNKSNVFSR
QLSALYTKSTLIGEDMQVANDSSDNELDNCGSYLMCLCQSETEGSXTKAANEEIMTFSFV
AVCPLTGDVIYDEFNDTPRCSELETRLQHIXIXELLISDALSQHMKSFIKMFTSQSRSQE
DSIRVEELPSKYFTDESAKQIIKDCTSQGSNTDNSTDKNGESTSKDSVQDTIVHKISSLP
TSTRVCYAVLFRYLKDFKLERVLGLSSNIVRFTSTKEYMKLDGCTVKNLELFKNEASRSR
EIESRLEGVSGILLSEASCLRKLKSILVRLPDLERGLCSIYSKKCSTTEFLTILKSLINV
YEIVSASQLEASKELTSPMLSXIFTEVPRLLKGADKFMNMIDQEAARTGDKTKLFRDETQ
FPDIEKCTKEMKRIVGELKSHRTYIRKTLQHPSLDYCTVAGNEFLIEVRNAKLGCVPSDW
IKISATKQVCRFRTPFVEEQYKLLCQQREMMSQVCNQAWLDYLDMVNQRYPLYIKAVQII
AVVDCLFSLATVAKQPGYVRPVLQDLETAELQIIQGRHPILDALLSESEQYVPNDTKLQG
NGNRCMVITGPNMGGKSCYIKQVALIAIMAQIGSFVPATQVKLKPLDAIYTRMGASDNIY
KGRSTFMVELQEAAFILDQATSRSLVILDELGRGTSTHDGIAVAYATLRHIVEKIGSLTL
FVTHYPNIAEVQKIYPDHVTNNHMAFMTSSDSDHQSPEKDAPLXENNGKCLPSVTFLYRL
VEGVAERSYGLNVARLAGIPRDILEVASHKSRELENEIVSRRLSRKKFERIWSATYANEI
QEVCNVE
NT seq 2904 nt   +upstreamnt  +downstreamnt
atgacaaagcttaaartatttgaaagggactctcaatatttcactagaaaggattcaaag
tctgcagaatatagtaacactaatacagaagatgacacaagtgattgcataattatgcat
gatamtagaatggaaaaaagtgaagaaaagactaatttcagctgttttagaaggaatacc
atgagtgattctaaagagaaatcatcttcaattgccaagaacccaagaactaaaacacaa
tacacaccattggaattacagtttattgaaatcaaagagaaatataaagatgctgtgttg
tttgtcgagtgtggttataagtacaagttttttggagaggatgccgagattgcatccaaa
gaactaaacattatgtgcttcatggatcataactttatggttgcaagtattccaactcat
agacttcatgttcacgtcaaaagactagtaaacaaaggctacaaggttggtgttgtcaag
cagacagaaacagctgctctcaaagctgctagcgacaacaagagcaatgtattcagtcgt
caactcagtgctttatacacaaagtcaactctgattggtgaagacatgcaagtagcaaat
gatagtagtgacaatgagctggataattgtggttcgtatttaatgtgcttgtgtcagagt
gaaacagaaggttcaycaacaaaggcggctaatgaagagattatgacttttagttttgtg
gctgtctgtccattgactggtgatgtcatctatgatgaattcaatgacactccaagatgy
agtgaactagagacaaggctacaacacattkgkatcwcagaactgcttatttcagatgct
ctctcacaacacatgaagagttttatcaaaatgtttacatctcaatctagaagtcaagar
gactccattagagttgaagaactgccatcaaaatacttcactgatgaatctgcaaagcaa
attattaaagattgcactagtcaaggtagcaacactgacaatagcactgacaaaaatggt
gaaagtacaagtaaagattctgttcaagacacaattgtacacaaaatctccagtctacca
acaagtacaagggtgtgctatgctgtactgtttagatacttgaaggattttaagttagaa
agagtactgggtctctcaagcaacattgtgcgtttcaccagtacaaaggaatacatgaaa
ctcgatggatgtactgtgaagaatcttgaactgtttaaaaacgaggcttcgcgcagtaga
gagattgaatcgcgtctagagggggtatctgggattcttttgtctgaggcttcttgtctt
cgtaagttgaagtctatcctagtacgtctgccagatttagagcgagggctgtgcagcata
tactctaaaaagtgctctaccaccgaatttctaaccattctcaagtctttgatcaacgtg
tacgagatcgtcagcgcatcacaacttgaggcttccaaggaactyacatctccaatgcta
tcmmaaatattcactgaggttccacgtcttttgaaaggagcagataagtttatgaatatg
atagatcaagaagctgcaagaacgggagataaaacmaagcttttcagagatgaaactcaa
tttccagatattgaaaaatgtacaaaggaaatgaaaagaatcgtgggagaactgaaatcc
catcgaacttacatccgaaagaccttgcaacatccatcattagattactgcactgttgcc
gggaatgagtttctaatcgaagtccgtaatgctaagctgggttgtgttccttcagactgg
atcaagattagcgcgaccaaacaagtgtgtcgttttcgracgccgttcgtcgaagagcag
tacaagttgctatgccaacaaagagaaatgatgtcacaagtatgtaaccaagcctggctg
gattacttagacatggtcaatcaacgataccccctctacatcaaggctgtgcaaattatt
gctgttgtcgattgtttgttttccttggcaactgttgctaagcaacctggatatgtacgg
cccgtgttacaggacttggaaacagctgagctacagatcattcaaggtagacaccccata
ctagatgcactgctgtcagagagtgagcagtatgttccaaacgacactaagttacagggc
aatggtaatcgttgtatggtgataacaggacctaatatgggtggtaaaagctgttacatc
aagcaggttgctctcatcgctatcatggcccagattgggtcgtttgtgccagcaacccag
gtcaaactgaagccactagatgctatctatacaaggatgggagcgtcagataatatctac
aaaggacgaagtacatttatggttgaattacaagaggcagcgtttattcttgaccaggcc
acttctcgatccctggttattttggatgaattaggacggggtactagtacccatgatggg
atcgctgtggcgtacgcaactcttcgtcacatcgttgaaaagattggtagtctgacacta
tttgtaacacactaccccaacatcgctgaggtccagaagatatatccagaccacgtgact
aacaatcacatggcatttatgacgtcatcagatagtgatcaccagtctccagaaaaggat
gctccrctttyggagaacaatggaaaatgtcttccatcagtaacgtttttgtatcgsctt
gtcgagggtgttgcagaaagaagttatgggcttaatgttgctcgacttgcgggaatcccg
agggatattcttgaagttgcctcgcataaatcaagggaattggagaatgaaattgtatct
agaagactttctagaaagaaatttgaacggatttggagcgcgacttatgctaacgaaatc
caagaagtttgcaatgtggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (45)   

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