KEGG   Exaiptasia diaphana (Aiptasia): 110252215
Entry
110252215         CDS       T05080                                 
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa03013  Nucleocytoplasmic transport
epa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:epa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110252215
  09122 Translation
   03013 Nucleocytoplasmic transport
    110252215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:epa03019]
    110252215
   03041 Spliceosome [BR:epa03041]
    110252215
Messenger RNA biogenesis [BR:epa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110252215
Spliceosome [BR:epa03041]
 Complex C
  Other components
   EJC/TREX
    110252215
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110252215
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 110252215
NCBI-ProteinID: XP_020914640
Position
Unknown
AA seq 552 aa
MADGYEKTRSTVKNFIEKASGKDAAKELANLSSKLAESDAERKYSVDQAFRDLVKDSLLK
DGDVERSEQLIAFAIEACQQGTCSPTLPFILLSDVFDSITLQLCEKLFGFVEEQVSVWTM
PLFFSAGKNLLLRMCNDLLRRLSTQQNTVFCGRIQMFLARLFPLSERSGLNLMSQFNLEN
VTKYNKKTEFESKDQSSDSMITDDGTEILPSAPVDYNLYRKFWALQDFFRNPTQCYTNEG
WKKFYQSSKEILNVFNSHKLEHTSRKKLSKNKSNEKPDTPTRKTDSSEEPRYFPKFLTNE
KLLDLQLSDSNFRRTILLQFIILFQYLTGTVKFKSNHHVLSELQTVAIKDMTELVYQLMR
EIPPDGEKFTKVAEHVLDREENWILWKNEGCPSFIKDKEKEPSEVPSKAPRKRTRSFGEE
ISSGWKSKKIQMGNSELTRLWNLCPNNLEACSSEKRVFLPTLEEYFGEAIEQSDPAAMIE
DEYKLIKDSNFGWRALRLLARRSQHFFQPSSNPFKTLPDYLESVVLQLAQELPSVKSEDG
AVVENGSTESNP
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggcggacgggtacgaaaaaactagatcaacagtcaaaaattttatagaaaaggcttca
ggaaaagatgcggcgaaagagctggcaaatttatcttccaagctcgctgaaagcgatgca
gagaggaaatattctgtagaccaggccttcagagacctcgtcaaagatagtttgcttaaa
gatggtgatgtggaaagatctgagcaactgattgcctttgccatagaagcatgtcaacaa
ggaacttgctcaccaactcttccttttattcttctgagtgacgtatttgacagtataaca
ttgcaactttgtgaaaaactctttggttttgtcgaagaacaagtatcagtatggactatg
cctttattcttcagtgctggaaaaaatctacttcttagaatgtgcaatgatttattacga
agactttcaacgcaacagaatactgtattttgtgggagaatacaaatgttccttgcaaga
ctgtttcctctatcagaaagatcaggtctgaacctgatgagtcagtttaacttagagaat
gttacaaaatacaataaaaagactgagtttgagagcaaagaccagtcatctgattcaatg
atcactgatgatggtacagaaattctaccaagtgccccagtcgattacaatttatacagg
aagttttgggcccttcaagacttctttaggaaccctacacagtgttacacaaatgaggga
tggaaaaagttttatcagagctctaaagagatcctgaatgtgtttaacagtcataaattg
gaacacacttcaagaaagaaattgtctaagaataaatcaaatgagaaaccggacacccca
acaaggaaaacagatagcagtgaagagcctcgctattttccaaagttcctcacaaatgag
aagctcttggacttgcagctcagtgacagcaacttcagaagaactatactcttgcagttc
atcatattatttcaatacctcacgggtactgtcaaattcaaaagtaatcaccacgttctg
agtgaacttcaaactgtagcaattaaagatatgacagaattagtttatcagctaatgaga
gaaatacctcctgatggggaaaagtttacaaaagttgcagagcatgtattagacagggaa
gaaaactggatcttgtggaagaatgaaggttgcccaagttttatcaaagacaaagaaaaa
gaaccaagtgaagttccctccaaggcaccaaggaagagaacaagaagctttggggaagag
atctcttctggttggaaatccaagaaaatccaaatgggaaattcagaactgactcggtta
tggaatctttgtccaaacaatctggaagcttgtagttctgagaaaagagtatttttacca
acactagaagagtatttcggtgaagccatcgaacaatctgatccagcagcaatgatagaa
gatgagtataaattaatcaaagacagcaactttggatggagagcattacgtctgcttgct
cggcgtagccagcactttttccagccgagctcgaaccctttcaagaccctaccagattac
ctggaaagtgttgttttacaattagcccaggaactgccgtcagtgaagtctgaggacggt
gcagtagttgaaaatgggtcgactgaatctaatccgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (42)   

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