KEGG   Erwinia pyrifoliae DSM 12163: EPYR_00378
Entry
EPYR_00378        CDS       T02121                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
epr  Erwinia pyrifoliae DSM 12163
Pathway
epr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:epr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EPYR_00378 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:epr03019]
    EPYR_00378 (pnp)
   03016 Transfer RNA biogenesis [BR:epr03016]
    EPYR_00378 (pnp)
Enzymes [BR:epr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     EPYR_00378 (pnp)
Messenger RNA biogenesis [BR:epr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     EPYR_00378 (pnp)
Transfer RNA biogenesis [BR:epr03016]
 Prokaryotic type
  tRNA degradation factors
   EPYR_00378 (pnp)
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 S1_2 aRib KH_2 SLS1_KH2
Other DBs
NCBI-ProteinID: CAY72680
Position
433385..435601
AA seq 738 aa
MSLVARMQNEDLKPTAGKNTRPDVKELTLLNPIVKKFQYGQHTVTLETGMMARQATAAVM
VSMDDTAVFVTVVGQKKSKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLTS
RLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALALSGLPFNGPIGAA
RVGYLNDQYVLNPTSDELKESKLDLVVAGTKGAVLMVESEAELLSEEQMLGAVVFGHDQQ
QIVIDNINALVAEAGKPRWDWQPEAVNEALRSRIAALAESRLSDAYRITEKQERYAQVDV
IKSETTAALLAEDEALDAGEISDLLHALEKDVVRSRILRGEPRIDGREKDMIRGLDVRTG
VLPRTHGSALFTRGETQALVTATLGTARDAQNLDELMGERTDNFLFHYNFPPYSVGETGM
VGSPKRREIGHGRLAKRGVLAVMPKGDAFPYTVRVVSEITESNGSSSMASVCGASLALMD
AGVPIKAAVAGIAMGLVKDDNNFVVLSDILGDEDHLGDMDFKVAGSREGITALQMDIKIE
GITREIMQVALNQAKGARLHILSVMEQAISGPRGDISQFAPRIHTIKISVDKIKDVIGKG
GSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKFAIRRIEEITAEIEVGRIYNGKVTRI
VDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEA
GEQAQPEAEAAPATPEAE
NT seq 2217 nt   +upstreamnt  +downstreamnt
ttgtcattagtcgcgaggatgcaaaatgaagatttgaaacccacggccggtaaaaatacc
cgcccggatgttaaggaactaactttgctgaacccgatcgtaaaaaaattccagtatggc
cagcacaccgtcactcttgaaaccggaatgatggctcgccaggcaacggcagccgttatg
gtgagcatggatgacactgctgttttcgtcaccgtggttggtcagaaaaaatcaaaacct
ggtcaggatttcttccctttgaccgtaaactaccaggagcgtacctacgctgctggccgt
attccaggcagctttttccgtcgtgaaggccgcccaagcgaaggcgaaacgctcacctcg
cgcctgattgaccgtccaatccgtccgctgtttccggaagggtttgtcaatgaagtgcag
gtgattgccaccgtggtctccgttaaccctcaggttaacccggatatcgtcgccatgatc
ggtgcttctgctgcgctggcgctgtctggcctgccgtttaacggacctatcggtgcggca
cgcgtcggttacctgaacgatcagtacgtgcttaacccaaccagcgatgagctgaaagag
agcaagctggatctggttgttgccggtactaaaggtgcggtgctgatggttgagtctgaa
gccgagctgctgagcgaagagcagatgctgggggcggtggtatttggccacgaccagcag
cagatcgtcatcgataacatcaatgcgctggttgctgaagcgggcaaaccacgttgggac
tggcagccagaagcggttaacgaggcgttgcgttcacgcattgctgcactggccgagtct
cgcctgagcgatgcttatcgcattactgaaaagcaggagcgctacgctcaggttgatgtc
atcaaatctgaaaccacggctgcgctgctggcggaagacgaagcgctggacgctggtgaa
atcagcgatctgctgcacgcgctggaaaaagacgtggtacgcagccgcattctgcgtggc
gaaccgcgtatcgacggccgtgaaaaagacatgatccgtggtctggacgtgcgcaccggc
gtgctgccgcgtactcatggctccgcactgttcacccgtggtgaaactcaggcgctggtc
accgccacgctgggtactgcccgtgatgcgcagaacctcgacgagctgatgggcgagcgt
actgacaacttcctgttccactacaacttccctccgtactctgtcggcgaaactggcatg
gtgggttcgcctaagcgtcgtgaaattggtcacggtcgtctggcgaagcgtggcgtgctg
gccgtgatgccaaaaggcgatgctttcccgtataccgtgcgtgtggtgtctgaaatcact
gaatcaaacggctcgtcttcgatggcgtccgtttgtggtgcgtctctggcgctgatggat
gcaggcgtgccaatcaaggccgctgtagccggcatcgcgatgggtctggttaaagacgac
aacaactttgttgtgctgtccgatattctgggcgacgaagatcacctgggcgacatggac
ttcaaagtagccggtagccgtgaaggcatcaccgcgctgcagatggacatcaaaattgaa
ggtatcacccgcgaaatcatgcaggtggctctgaaccaagctaagggtgcgcgtttgcac
attctgagcgtcatggagcaggctatcagcggtccgcgtggcgatatttctcagtttgca
ccgcgtatccacaccatcaagatcagcgttgataaaatcaaagacgtgatcggtaaaggt
ggctcggtcattcgtgcgctgacggaagaaaccggcaccactatcgaaatcgaagatgat
ggcacggtgaaaatcgcggctaccgacggtgaaaaagctaaatttgctatccgtcgtatc
gaagagatcaccgcagagatcgaagtgggtcgtatctacaacggtaaagtgacgcgcatc
gttgattttggtgcctttgtggctatcggtggtggtaaagaaggtctggtacatatttct
cagatcgccgacaagcgtgtagaaaaagtgacagactatctgcaaatgggccaggaagtt
ccggtgaaagtactggaagttgaccgccagggtcgcgtacgcctgagcatcaaagaagct
ggcgaacaggctcagcctgaagcagaagccgctcctgccacaccagaagccgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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