KEGG   Erwinia pyrifoliae Ep1/96: EpC_08840
Entry
EpC_08840         CDS       T01000                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
epy  Erwinia pyrifoliae Ep1/96
Pathway
epy03030  DNA replication
epy03430  Mismatch repair
epy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:epy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EpC_08840 (dnaE)
   03430 Mismatch repair
    EpC_08840 (dnaE)
   03440 Homologous recombination
    EpC_08840 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:epy03032]
    EpC_08840 (dnaE)
   03400 DNA repair and recombination proteins [BR:epy03400]
    EpC_08840 (dnaE)
Enzymes [BR:epy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EpC_08840 (dnaE)
DNA replication proteins [BR:epy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EpC_08840 (dnaE)
DNA repair and recombination proteins [BR:epy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EpC_08840 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP DNA_pol_IIIA_C HHH_6 tRNA_anti-codon tRNA_anti_2
Other DBs
NCBI-ProteinID: CAX54663
Position
1020229..1023711
AA seq 1160 aa
MAEPRFIHLRVHSDYSMIDGLAKTGSLVKYAASMGMPAIGITDFTNLCGLVKFYGTAHGQ
GMKPIIGADFNVSSEAMGDELTQITVLAADNDGYQNLTLLISRAYQRGYGPAGPTIDRDW
LAEHQQGLILLSGGRRGDVGKMLLRGNPTQVNECLNFYQQYFPDRYYLELIRTGRPDEET
YLHAAVELAVARGVPVVATNEVCFLAESDFDAHEIRVAIHDGFTLDDPKRPRHYSPQQYL
RSEEEMCELFSDIPEALENSVEIARRCNVTIRLGEYFLPQFPTGEMSTEDFLVVKSKQGL
EERLEFLFPDEKLRAVRRAEYDERLDIELNVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAE
MYGRKAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTQITDFAPLYCDENGDHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALAMINAKRAKSGEAPIDIAAIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKARGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYQFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARNEGGYFRELFDLCARTDTKKMNRRMLEKLIMSGAFDRLGPHRAALMS
ALPDALKAADQHAKAEAIGQVDMFGVLAEAPEQVEQSYSDVKPWPEQIQLDGERETLGLY
LTGHPINQYLKEIERYVGGQRLKDMHPTERGKMTTAAGLVVAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKFQHMLEKDRILIVSGQVSFDDFNGGLKMMARDMMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPYRSGTIPVHLYYQREDARAKLRFGATWRVSPSD
RLLNDLRSLIGSEQVELEFD
NT seq 3483 nt   +upstreamnt  +downstreamnt
atggccgaacctcgttttattcatttacgcgttcacagcgactactccatgatcgatggg
ctggcgaaaacgggctcattggtgaaatacgcggcaagcatgggtatgccggccatcggc
atcacggattttaccaacctgtgtgggctggtgaagttttacggaacggcgcacggccag
ggcatgaagccgattattggcgcagatttcaacgttagcagtgaagcgatgggcgatgag
ctgacgcaaatcaccgtattagccgccgataatgatggctatcagaacctgacgctgctg
atttcacgcgcctatcagcggggttacgggccggcggggccgaccatcgatcgtgactgg
ctggctgaacatcagcaggggctgatcctgctctccggcggtcgtcgtggcgatgtcggc
aaaatgctgttgcgcggtaaccctacgcaggttaacgagtgtctgaacttctatcagcaa
tattttcccgatcgctattaccttgagctgatccgcaccgggcgtcctgatgaagagacg
tatctgcacgcggcggtagaactggcggtcgcgcggggtgtgcctgttgtcgccaccaac
gaagtctgcttcctggccgaatcagactttgatgcccacgagatccgcgtggcgatccac
gacggtttcacccttgacgatcccaagcgcccgcgccattacagcccgcagcagtatctg
cgcagcgaggaggagatgtgcgagctgttctcggacattccggaagcgctggaaaacagc
gtggaaatagcccgtcgctgcaacgtcaccatccgtcttggcgaatatttcctgccgcag
ttcccgaccggcgagatgagcacggaagatttccttgtggtgaaatcgaagcagggcctg
gaagagcgtctggaatttctgttcccggatgagaagttgcgtgccgtgcgccgtgctgaa
tatgatgaacgtctggatattgagctgaacgttatcaatcagatgggcttcccaggttac
ttcctgatcgtcatggagttcatccagtggtccaaggataatgatgttcctgtcggacca
ggacgcggttcaggggccggttcgctggtggcctatgcgctgaagatcaccgacctcgac
ccgctggaatttgacctgctgtttgaacgtttccttaacccggaacgcgtttcgatgccc
gattttgacgtcgacttctgcatggaaaaacgcgacctggtgattgagcacgttgcggag
atgtacggccgcaaggcggtgtcacagattatcaccttcggtacgatggcggcgaaagcg
gttatccgcgacgtcgggcgcgtattgggccatccttatggctttgtcgatcgtatctcc
aaattggtgccgcccgatcctggcatgacgctagaaaaagcctttgccgccgaaccgcag
ctgccggaaatttacgaagcagacgaagaggtaaaagcgctgatcgatatggcgcgcaag
ctggaaggcgtgacgcgtaacgccggtaaacatgccggtggcgtggtgatcgcgccaacg
caaatcaccgattttgcccccctgtactgcgatgaaaacggcgaccatccggtcacccag
tttgacaaaaatgatgtggaatatgccgggctggtgaagtttgatttcctcggtctgcgc
acgctaaccattattgactgggcgctggcgatgattaacgccaagcgtgcaaagagcggt
gaagcgccgattgatatcgctgcgattccgcttgaagataaaaaaagtttcgatatgctg
caacgctcggagaccacggcggtattccagcttgaatcgcgcggcatgaaggatttgata
aagcgcctgaagcctgactgtttcgaggacatgatcgcgctggtggcgctgttccgcccg
gggccgttacaatccggcatggtggataactttatcgaccgtaagcacgggcgcgaagag
atatcctacccggatattcagtggcagcatgagtcgcttaagccggtgctggagccgacc
tatggcatcatcctgtatcaggaacaggtgatgcagatagcccaggtgctggccggttac
agcctgggcggggcggacatgttacgccgtgcgatgggtaaaaagaacccggtggaaatg
gccaagcagcgaggcggcttcgaagacggggcgaaagcacgcggcgtagacggcgaactg
gcgatcaaaattttcgatctggtggagaaattcgccgggtacggctttaacaaatcgcac
tctgccgcctatgccctggtttcctatcaaaccctgtggctgaaagcgcattacccggcg
gagtttatggcggcggtgatgacggccgatatggacaacaccgaaaaggtggttggcctg
gtggatgagtgctggcggatggggctgaaggtactgccgccggacattaattccggcctg
taccagttccacgtcaatgacgaaggcgaaatcgtttacggcatcggcgcgattaaaggg
gtcggtgaaggtccgatcgaagcgattatcgaggcgcgtaacgagggcggttatttccgc
gagttatttgacctctgcgcgcgtaccgacaccaaaaaaatgaaccgccggatgctggaa
aaattaattatgtccggtgcgtttgaccgtttaggtccgcaccgtgctgcgttgatgagc
gcgctgccggatgcgttaaaagccgccgaccagcacgctaaggcagaggcgattggccag
gtggatatgtttggcgtgctggcagaagccccggagcaggtggagcagtcctattcagac
gtcaaaccgtggccggaacagattcagctggacggcgaaagggaaaccttagggctttac
ttaaccggccacccgatcaaccagtatctgaaagagattgagcgctatgtcggtggacag
cgcctgaaagacatgcacccgaccgagcgtggtaaaatgaccaccgccgccggtctggtg
gtggcggcccgcgtgatggtaactaaacgcggtaaccgtattggcatctgcacgctggat
gaccgttctggtcgcctggaagtgatgttatttacagatgcgttagacaagttccagcat
atgctggagaaagaccgtattctgatcgtcagtgggcaggtcagcttcgatgacttcaac
ggcgggcttaaaatgatggcccgtgatatgatggacatcgatgaagcacgcgaaaaatat
gcgcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccgt
ctccgtcaatcccttgaaccttatcgttcggggacaattccggtacatctctactatcag
agagaagatgcgcgggcaaagttgcgctttggtgcaacctggcgcgtgtcgccgagcgat
cgtttgttaaacgatctgcggtcgttgataggatcggagcaggtggaactggagtttgac
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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