KEGG   Agathobacter rectalis M104/1: ERE_19170
Entry
ERE_19170         CDS       T02588                                 
Name
(GenBank) Superfamily I DNA and RNA helicases
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
era  Agathobacter rectalis M104/1
Pathway
era03420  Nucleotide excision repair
era03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:era00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ERE_19170
   03430 Mismatch repair
    ERE_19170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:era03400]
    ERE_19170
Enzymes [BR:era01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ERE_19170
DNA repair and recombination proteins [BR:era03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ERE_19170
   MMR (mismatch excision repair)
    Other MMR factors
     ERE_19170
SSDB
Motif
Pfam: UvrD_C UvrD_C_2 AAA_19 UvrD-helicase Viral_helicase1 DEAD SLFN-g3_helicase CYP38_PsbQ-like AAA_30 T2SSE NACHT
Other DBs
NCBI-ProteinID: CBK93834
Position
complement(1953486..1956620)
AA seq 1044 aa
MMGTENDLLGISLKDEQRQLQNIIGIAQDNLDRAKESVKKLTDDLEDLRDVYEAQDKEGL
ALWNNATAQLHENERNIVRCEKARKKPYFGRIDFKDPRQKSQESYYIGRVGIAKNASEPV
VIDWRAPIASVYYESSLGPCKYTVSSEGTFEIDLNRKRTYEIADDKLIDFFDSDVVANDE
LLTKYLAKNKKAVLGEIIATIQKEQNLIIRRSPKTNIIVQGVAGSGKTTVAMHRISYILY
NYADDFRPEDFYIIGSNHILLNYITSVLPELDVYGIKQMTMEQLFTRLLYEDWDDKKYSI
HEVSKNDSRNSIKGSKEWFEALEKFCLDYEEKCIPRDEVYMEKTGNLLVGKVLIDTYLHD
NPLLSMQSKILMLNEIIYSKYENEVLGKEVKFPAKERRELDKKYKTYFGKDDWKGSVYDF
YRDFLHSQKEYDIAIPKDSFDVYDLAALAYIYKRIKETDPVREASHVVIDEAQDFGMMAY
CCLHYCLRNCTYTIMGDTSQNIHFEYGLNDWEDLKKLILTGTYDAFGLLRKSYRNTVEIS
EFATEILRHGDFAIYPVEPIIRHGNAVRIEEYANVRSLISASVDTIKGWQSEGYETIAVV
CRDEAEALKVSAELKKHIEIADDDIETAQFGAGVMVLPVAYTKGLEFDAVLLFDPSERKY
PADDSHVKLLYVAATRALHELAVFHRGRLTPLIADPAPSNRHQKEFSAEPLTKAKEYEKQ
QLTEKEIEEQKRVDGRRDMDEREYFGPSRIALKPEQVTNKAENEKLDLSAFVKKDRENQT
QCTATDMANKIKIKEVSKAAKKSSLPLNPSPYAYGSIPDNDILRVKGHSKGKFAVKWLKK
GKSHVEIATADGTLYVIPITPEIVRVIFVKGIGVKPHKTYWKQKADTAFKWVAKESKSLI
EIQTEKLILRIEKKNGAIQYFDADKNLLVSENATEPRLLNNGECYTFFDWDKSEKLKSKG
ILATDLTDLTNKARYISFGGRQQRLPLVVSNKGYGIAPASSRTALFCNIKMYGQYIFIDC
DTQSDYYFICGGSVGYTLELYGTL
NT seq 3135 nt   +upstreamnt  +downstreamnt
atgatgggcacagaaaatgatttactgggaatttcattaaaagacgagcagagacagctt
caaaatatcatagggattgcacaggataatctggaccgtgcaaaggaatcggtaaaaaag
ctgacagatgatttagaggatttaagagatgtctacgaggcgcaggacaaggagggactt
gccctgtggaacaatgcgacagcgcagcttcatgagaacgagagaaatattgtaagatgt
gaaaaggcgcggaaaaagccgtattttggcagaatagattttaaggatccgcgtcagaag
tcacaggagtcctactatataggcagagttggtattgcgaagaatgcatcagagcctgtg
gtcattgactggagagcaccgattgcatccgtatattatgagagcagtcttggaccatgt
aagtacacggtgagctcagagggtacttttgagattgatttaaacagaaagcgcacctat
gagattgcagatgataagctcatcgacttttttgattcagatgtcgtagcaaatgatgag
cttctgacaaagtacctggctaagaataaaaaggcagtgctcggagagattattgcgaca
atccaaaaggagcaaaaccttattatccgccgttcgccaaagacgaatatcattgtgcag
ggagttgcaggctcaggaaagacaacggttgcaatgcacaggatatcgtacattttatat
aattatgctgatgatttcagaccggaggatttctacattataggcagtaaccacattttg
ttgaactatattacaagtgtgcttccggagcttgatgtgtacggcataaaacagatgact
atggagcagctttttacaaggcttttgtacgaggattgggatgacaaaaagtacagcata
catgaagtcagcaaaaatgacagtagaaacagcataaagggcagtaaagaatggtttgaa
gctcttgaaaaattctgtttagattacgaggaaaagtgtattccgagagatgaggtctac
atggaaaaaacaggcaatctgcttgtgggaaaggtgctgatagacacttatctgcatgat
aatccgcttctttccatgcagagtaaaatcctcatgttaaatgagataatttactcgaag
tatgaaaatgaggttctcggtaaggaagtgaagttccctgcaaaggagcgcagggagctt
gataaaaaatacaaaacctatttcggtaaggatgactggaaaggctctgtgtatgatttt
tacagggattttctgcatagtcagaaggaatatgatatagctattccaaaggactcattt
gatgtgtatgatctggcagcgcttgcgtatatttataagcgcatcaaggagacagatccg
gttcgtgaggcgagtcatgtggttattgatgaggcacaggattttggcatgatggcatac
tgctgtctgcattactgcctcagaaactgcacatacactatcatgggcgatacctcgcag
aatatacattttgagtatggcttaaatgactgggaggacttgaaaaagctgatactcaca
ggcacatatgatgcattcggtctgcttcgaaagagctacagaaacactgttgagatttca
gaatttgcaacagagatactgcgccatggagattttgcaatctatccggtggagcctatt
attaggcatggaaacgcagtgcgcatagaggagtatgccaatgtgcgctcactgatttcg
gcatcggttgacacgataaaaggctggcagagtgaaggctatgagacgatagctgtcgtg
tgccgtgatgaagcagaggctctcaaggtgtctgctgagcttaaaaaacatatagaaata
gcagatgatgatattgaaacggcacagtttggtgcaggagtcatggtacttccggtcgcg
tatacaaagggacttgagtttgatgctgtattgctgtttgacccatcagagagaaaatat
ccggctgatgatagtcatgtgaagcttttgtacgttgcggctacccgtgcacttcatgag
cttgctgtattccaccggggcaggctgacaccgcttattgcagaccctgctccttccaac
aggcatcagaaggagttttctgcagagccgctcactaaggcaaaggaatatgaaaagcag
caactgacagaaaaagagatagaagagcaaaagcgtgttgatggcagacgcgatatggat
gaaagagagtattttggtccgtcgcgcattgcattaaaacctgagcaggtgacaaataag
gctgaaaatgagaagcttgatttatctgcatttgtaaaaaaagacagggaaaatcaaaca
caatgtactgctacagatatggcaaataaaattaagattaaggaagtaagtaaggctgca
aaaaagagcagcctccctctcaatccctccccatacgcatacggctcaatcccggacaac
gatatacttcgtgtaaagggacattcaaagggcaagtttgcggtaaaatggctcaaaaaa
ggtaaatcgcatgttgaaatcgccacagcggacggcacactttatgtgataccaataaca
ccggagatagtacgcgtaatctttgtaaaaggaattggagtgaagccgcacaaaacctat
tggaagcaaaaggccgatacagccttcaaatgggtggcaaaagaatccaaatcgcttatt
gaaattcaaacggagaagctgatactaaggatagaaaagaaaaacggagccatacagtat
tttgatgccgacaaaaatctccttgtaagtgaaaatgccacagagccaaggcttttaaat
aatggcgagtgctacacattttttgactgggacaaatcggaaaagctcaaatccaaggga
atacttgcgacagaccttactgatttgacaaacaaagccagatatatttcgttcggaggc
agacagcagaggctgccgcttgtcgtgtcaaacaagggctatggaatcgcaccagcatca
agtcgcacagcactgttttgcaatataaagatgtatgggcagtatatctttatagactgt
gacactcaaagcgactattactttatatgcggaggcagtgtggggtatacgcttgagctg
tacggcacgttataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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