KEGG T02588: ERE

Agathobacter rectalis M104/1: ERE_30360

Entry

ERE_30360         CDS       T02588

Name

(GenBank) DNA topoisomerase IV subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

era Agathobacter rectalis M104/1

Brite

KEGG Orthology (KO) [BR:era00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:era03032]
    ERE_30360
   03400 DNA repair and recombination proteins [BR:era03400]
    ERE_30360
Enzymes [BR:era01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     ERE_30360
DNA replication proteins [BR:era03032]
Prokaryotic type
  DNA Topoisomerases
   ERE_30360
DNA repair and recombination proteins [BR:era03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ERE_30360

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 TOPRIM_C

Other DBs

NCBI-ProteinID:

CBK94829

Position

3123168..3125090

AA seq 640 aa
MAKKQTYDEKSIAILEGLEAVRKRPGMYIGSVTTKGLNHLIYEIVDNSVDEHLAGACDTI
RVTLEKNGSCTVEDNGRGIPVGMHAKGVSAARVVFSTLHAGGKFDNSVYKTSGGLHGVGS
SVVNALSTYMDVEISRDGYIHHDRYEKGVPVVELENGLLPTLGKTKKTGTRINFLPDPEI
FEKTRFKEEDVKNRLKETAYLNPKLTIIYEDKRGDATEHIEYHEPEGIVGFVKDLDKNIE
KLHDVIYFTGESEDIKVEVAFQYTSEFHENILGFCNNIYNSEGGAHITGFKTAFTGIINS
YARELGILKDKDANFNGADVRNGMTAVVSVKHPDPRFEGQTKTKLDNQDANRATAKVTND
EVPLYFDKNLEVLKTVISCAEKAAKIRKAEEKAKTNLLTKQKFSFDSNGKLANCESRDAS
KCEIFIVEGDSAGGSAKMARNRMFQAIMPIRGKILNVEKASIDKVLANAEIKTMINAFGC
GFSEGYGNDFDITKLRYDKIIIMADADVDGAHISTLLLTLFFRFMPELILEGHVYVAMPP
LYKAIPSKGEEKYLYDDAELDKYRKTHTGKFTLQRYKGLGEMDADQLWDTTLNPATRMLK
RIEIEDGRLANDVTSLLMGSDVPPRKEFIYEHAHDAELDV

NT seq 1923 nt +upstreamnt +downstreamnt
atggccaagaagcaaacatacgatgagaagagcatagcaattttagaaggacttgaggca
gtcagaaaaagaccgggtatgtatataggaagtgtcacaaccaagggactaaaccatctg
atatatgagattgtggacaactccgtagatgagcatctggcaggtgcctgtgataccata
agggtaactcttgagaaaaacggttcgtgtacggtggaggataacggacgtggaatacct
gtaggtatgcatgctaagggtgtatctgcggcgcgtgttgtattctcgacactgcacgca
ggaggtaaatttgacaattctgtatacaagacaagcggaggtctgcacggagttggttcg
tcggttgtaaatgcattatccacatatatggatgtggagataagcagagatggctatatc
caccatgacagatatgaaaagggtgttcctgttgtggagcttgaaaatggcctgcttcct
actttaggcaaaaccaaaaaaacaggaacaaggattaatttcctgcctgacccggagatt
tttgagaagacaagattcaaggaagaggatgtaaagaacagactgaaggagactgcatat
ctcaatccgaagcttaccatcatatacgaggataaacgaggcgatgcgacagagcatatt
gagtatcatgagcctgagggtattgttggttttgtaaaggatttggataaaaatattgaa
aagctgcatgatgtcatttactttacaggagagagtgaggatataaaggttgaggtggct
tttcagtatacaagcgagttccatgagaatattctaggtttttgcaacaatatatacaat
tctgagggtggagcgcatatcacaggctttaagactgcgtttacaggtattatcaattca
tatgccagggagcttggtatattaaaggacaaggatgcgaatttcaacggagcagatgtc
agaaacggcatgactgctgtagtgtcagtaaagcatcctgaccctagattcgagggtcag
acaaagacaaagcttgacaatcaggatgcaaaccgtgcaactgccaaggtgacaaatgac
gaggtaccgctttattttgacaagaatcttgaggttttaaagacggtaatatcatgtgct
gagaaggccgcaaagattagaaaagctgaggagaaggcaaagaccaatctgctcacaaag
cagaagttttcctttgattcaaacggaaagcttgcaaactgtgagagcagggatgcttct
aagtgcgagattttcatagtcgagggagattcggccggaggctcggcaaagatggcaaga
aaccgtatgtttcaggcaatcatgccgattcgaggcaagattttgaatgttgaaaaggca
agtattgataaggtactggcaaacgctgaaataaagacaatgataaatgcgtttggctgc
ggattttcggaagggtatggaaatgattttgatataacaaagcttcgctatgacaaaatc
atcattatggccgatgctgatgtggacggagctcatatctccacactgcttttgactctg
ttcttcaggtttatgcctgagcttattttagagggacatgtatatgttgccatgcctccg
ctttacaaggctattccgtcaaagggcgaggaaaaatatttgtatgacgatgcggagctt
gacaagtacagaaagacacatacaggcaagtttacgttgcaaagatataagggtcttgga
gagatggatgcggatcagctctgggataccacactaaatcccgcaacaaggatgctaaag
cgtattgaaatagaggatgggcgcctggcaaatgatgtgacatcactgcttatgggtagt
gatgtgccaccgagaaaagagttcatatacgagcatgcgcatgacgcggagctggatgtg
taa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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