KEGG   Eremothecium cymbalariae: Ecym_3534
Entry
Ecym_3534         CDS       T02237                                 
Name
(RefSeq) Hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
erc  Eremothecium cymbalariae
Pathway
erc03030  DNA replication
erc03410  Base excision repair
erc03420  Nucleotide excision repair
erc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Ecym_3534
   03410 Base excision repair
    Ecym_3534
   03420 Nucleotide excision repair
    Ecym_3534
   03430 Mismatch repair
    Ecym_3534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:erc03032]
    Ecym_3534
   03036 Chromosome and associated proteins [BR:erc03036]
    Ecym_3534
   03400 DNA repair and recombination proteins [BR:erc03400]
    Ecym_3534
DNA replication proteins [BR:erc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    Ecym_3534
  DNA Replication Termination Factors
   ELG1-RFC complex
    Ecym_3534
Chromosome and associated proteins [BR:erc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    Ecym_3534
DNA repair and recombination proteins [BR:erc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     Ecym_3534
  Check point factors
   HRAD17(Rad24)-RFC complex
    Ecym_3534
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_assoc_2 AAA_16 AAA_22 Rad17 RuvB_N ResIII AAA_14 AAA_24 DUF815 AAA_30 AAA_11 AAA_5 AAA_18 DEAD AAA_3 AAA_7 bpMoxR AAA_28 DNA_pol3_delta Mg_chelatase AAA_19 nSTAND3 Viral_helicase1 ATPase_2 RNA_helicase TniB DUF4442 SRP54 AAA_2 HAD_2 AAA_33 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 11469103
NCBI-ProteinID: XP_003645828
UniProt: G8JQM7
Position
3:1013065..1014063
AA seq 332 aa
MSNTKGTVENLPWIEKYRPERLDEVYGQTRVVETVRKFAQEGRLPHLLFYGPPGTGKTST
ISALAREIYGKNYRKMVLELNASDDRGIDVVRNQIKEFASTRQIFSKGFKLIILDEADAM
TSAAQNALRRIIERFTKNTRFCILANYAHKLTPALLSRCTRFRFQPVPAQSIERCVLNVM
AHEHLTLAEDARRALLRLANGDMRKALNVLQASKATLDNPEKDQVTEDTIYECIGAPHPK
DIESLMESILKDDWTTASYTVNKIKTNHGLALIDMIEGFVELLEEYELKESTRIELLCKL
ADIEYAISKGGTDKIQSSATIAAIKFSMELEL
NT seq 999 nt   +upstreamnt  +downstreamnt
atgtcgaatactaaaggcactgttgaaaacctgccatggatagagaagtatagaccagag
aggttggacgaggtctacggccagacaagagttgtagaaactgttcgaaagtttgcacaa
gaggggaggctgccacacctattattttatggtccacctggtactggtaagacaagtacc
atatcagcattggctcgcgagatctatggtaaaaattatcggaagatggttttggaattg
aatgcgtctgatgatcgtggtattgatgttgtaaggaaccagatcaaggaattcgcgtct
accaggcagatattcagtaaagggttcaaattgattattttggatgaggcagatgctatg
acttcagctgcacagaatgcattgaggcggattatcgagaggtttaccaaaaacacaagg
ttttgtattttggccaattatgcccataagttgacgcctgcattgttaagtagatgcacc
agattccggtttcaacctgtcccagcgcaatccatagaacgctgtgtgttgaatgttatg
gcacatgaacatttaacgttggcagaagatgctaggagggcattgttaagactagctaat
ggtgatatgagaaaggctctaaatgtattgcaagcatctaaggcgactttggataatcct
gaaaaggatcaggtcactgaggataccatatatgaatgcattggcgccccccatccaaag
gatattgaaagtctaatggaaagcatactcaaagacgattggaccacagccagctatacc
gtaaacaaaatcaagacaaaccatggtcttgctcttattgacatgattgaggggttcgtt
gaactgctagaagagtatgaactaaaagaaagtacaagaattgaacttctatgtaaacta
gcagatatagaatatgctatatctaaaggtggtactgacaaaattcaatctagtgccacc
attgctgccatcaaattcagtatggaattggagctatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (35)   
   Pfam (35)   
All databases (51)   

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