KEGG   Eremothecium cymbalariae: Ecym_6343
Entry
Ecym_6343         CDS       T02237                                 
Name
(RefSeq) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
erc  Eremothecium cymbalariae
Pathway
erc03420  Nucleotide excision repair
erc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Ecym_6343
   03430 Mismatch repair
    Ecym_6343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:erc03400]
    Ecym_6343
Enzymes [BR:erc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Ecym_6343
DNA repair and recombination proteins [BR:erc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Ecym_6343
   MMR (mismatch excision repair)
    Other MMR factors
     Ecym_6343
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Arif-1 AAA_11
Other DBs
NCBI-GeneID: 11471107
NCBI-ProteinID: XP_003647536
UniProt: G8JUD9
Position
6:complement(660862..664419)
AA seq 1185 aa
MLLKPNIQWPLHCKHKAAFLNYQRVQKTPFARETTTNRVLLSNRVRDGASWLQLEDLPIS
YIMEFDLFNGLNPRQYEAVTFDPTKALQIVAGPGTGKTKVLTTRYVYLIAFKNINPLSII
MTTFTKKAADEIKARVEPILRKCGYDTNKLLIGTFHSICNNLLHQYGHLIDLPNHWRVFA
SSEVDPIVKKLVEECPDQIRDYALSYRANKVNLCLPNRKSEWALAEKQIIKNISRLKAEA
LSPEAYKNLDSHDEALYYFYNAYQVEMLRQGGLDYDDLLFYSYKLLSKNRCWNHIKHVMV
DEFQDTNNIQLELMYLLSRGKHQSCEGVTAVGDPDQSIYAFRSALARNFDEMIQKCPIEY
GQVVLEENYRSTQNILDTSEYVIKQQSDGRNQRLPLRAQFSYDIKPVYMKFPDGFLEGPT
ICKEILYLKAIPDLFSFNDIAILVRQRRQIKAIERALIDHRIPYKIIKSVSFWERRETKA
MLDLLKVVCSDLDRYAIIRSLQYPSKGLGDVSIAKIEKLFDEELDKPAFVVLKELADGLK
DHKFPAKGKVSIKNFVSLIETARKLCDENPKMSTRDELFEYLYDASGMKNEFLFEDDKAD
RKAKALEECEPNKYNKRHKNIELVKSHFLGFHPDEMDPKYRIEMNPDTNQPCIVNDAPVI
KQDGEGLENLSKYFNSKLKPLTGKFDTSCGERVANNDAKQENENPRIDIYKFLRQFIEFI
NLYTTNEALDPSCLTEDQVAAKKQRDKNGILTVTTIHGSKGLEWPIVFVPGCVEGIIPCV
YANSRDDDSEEENDVEDAKDTEDLQNSNDNSPKKGKQSKASESIDEERRMFFVALTRAKF
LLYVSAIENNERVPIIPSQFLTPEVMRTLTGSQQLFDKVDYIDSLYEAMHKEPKRTPSFC
LERLLEDYHNFVAANREFLIWKKEKILHVNTIDFGENIQTERFNMGITTASKQLKRSEKM
LFGQDLNPCSRQSANYAPTISRKPSNTITRKQFAPPPTLSQRAPNTTGKTFAPKPNEHLK
PPTENPKESVRRHKYVKIRSNTLEDVVIASECPQITGVKERVRSGMLSPSKSQHRIVAEE
IRLEDLSDEDQCGEVNIKRDEVTAAELLHNPNDLEVDNRPILTNAKVLADASRIEISKKL
NGGTKRNRNRKKIKKESENDNDILMRLKRARKATPTISDEVIVLD
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgcttttaaagcccaatattcaatggccacttcattgcaaacacaaggcagctttttta
aattatcaacgcgtgcagaagacgccttttgcaagagaaaccacaacaaacagagttctg
ttaagtaatagggtaagagacggagcaagctggttgcagctggaagatctacctatctca
tatattatggagtttgatctatttaatggattgaacccacggcagtatgaggctgttact
ttcgatcctacaaaggcattacagattgttgctggtccaggcaccggtaaaacaaaggtg
ctaacaactaggtatgtctacctaattgcatttaaaaacatcaaccccctttcaattatt
atgacaacatttacgaagaaagctgcggatgaaattaaggctagagtggaacctattctt
cgaaagtgcggctatgataccaacaaattgttaattggtacttttcactcaatttgcaac
aatcttttacatcaatatggccatttaatcgatttacctaatcattggagggtatttgcg
agctcagaagtcgatcctattgttaaaaagttggttgaagagtgcccagatcagatccgt
gattatgctctttcttatcgtgcaaacaaggtcaacttatgcctgccgaatcgcaaatct
gaatgggcattagctgagaaacagattattaaaaatatctcccgcctaaaagcagaagct
ttaagcccagaagcatacaagaaccttgattcacacgatgaagctctttattatttttac
aatgcttatcaggtagagatgttaagacagggggggcttgactatgatgatctgttattt
tactcatataaacttctatcgaagaacagatgctggaaccatattaagcatgtaatggtt
gatgaattccaagacaccaacaacattcagttagaactaatgtatctattatcaagagga
aaacatcaatcttgcgaaggagtcactgcggttggagatccagaccaaagtatctatgca
tttcgttcagcattggcccgaaattttgatgagatgatccaaaaatgtcctattgaatat
ggtcaagttgttttggaagaaaactatagatcgactcaaaatatccttgatacttcagaa
tatgtcataaagcaacagtcagatggaagaaatcaaagactgccactacgtgcacagttt
tcatatgatatcaaaccggtttatatgaagtttcctgatgggtttttagaagggcctaca
atttgtaaagagatcctatatttgaaggccatcccagatttgttttccttcaacgatatt
gcaatcttagttcgacagaggagacaaataaaagcaattgaacgggcattaattgaccat
agaatcccatacaaaattatcaagtccgtttcattttgggaacgaagagagacaaaagca
atgctggacttgcttaaagtggtatgctcagatttagacagatatgcaattatcagatct
ttacagtacccctctaaaggcctcggtgatgtaagtattgcaaaaattgaaaagttattt
gatgaagagttagataagcccgcatttgtagtcttgaaagaacttgcggatggcctgaaa
gatcataaattccccgctaaaggtaaagtttcaataaagaattttgtttctctcattgaa
accgctaggaagttatgtgatgaaaacccaaaaatgtctactagggatgagttatttgag
tatttgtatgatgcatcaggcatgaagaatgagtttctttttgaggacgataaggctgat
agaaaagccaaagctcttgaagaatgtgagcctaacaaatacaataaacgccacaagaat
atcgaacttgttaaatctcactttttggggtttcacccagacgaaatggatccgaagtat
aggattgagatgaatccggatacaaatcaaccgtgtatcgtaaacgatgcacctgttata
aaacaagatggagaaggattggagaatttaagcaaatactttaattctaagcttaaacca
ttaacagggaaatttgatacaagctgtggagaaagggtggcaaataatgatgcaaaacag
gaaaatgagaacccaagaatagatatctacaaatttctacgtcaatttattgagttcata
aacttgtacactacaaacgaagctttagacccatcttgcttaactgaagatcaggttgct
gctaagaaacaaagagataaaaatggaatacttactgtcacaaccattcatggctctaaa
ggtcttgagtggccaattgtttttgtaccaggttgtgttgaaggtataattccctgtgtt
tatgcaaattcaagagatgatgactctgaagaggaaaatgacgtcgaggatgctaaggat
acagaagatcttcaaaattcgaatgataatagccccaaaaaagggaagcagtcgaaagct
tcagaaagtattgatgaggagcgtcgtatgttttttgtagcactaactagagcaaaattc
ctactttatgttagcgctatagagaataacgagcgagttccaattattcctagccaattt
ttaacacctgaagttatgcgaacgttgactggatcacaacagttatttgataaagtggat
tatattgattctttgtatgaagcgatgcataaagaaccaaaaaggactccaagtttttgt
ctcgaaaggttgctggaagattatcataactttgtagctgctaatcgtgagttcttgata
tggaaaaaggagaagatattacatgtaaatactattgacttcggtgaaaatattcaaacc
gaacgttttaacatgggaatcaccactgcatcaaaacaattaaaaagaagtgaaaaaatg
ctatttggtcaagacttgaatccatgttcacgacaatctgcaaattatgctcccacaata
tctaggaaacccagtaatacaattaccaggaagcaatttgctccacctccaaccttatct
caaagggccccaaacaccactggaaaaacgtttgcaccaaagcctaatgaacatctgaag
ccgccaactgaaaatcctaaggaatctgtaagacgtcataaatacgttaaaattaggagt
aatacactcgaagatgtcgttattgcaagtgaatgcccgcaaataacaggcgttaaagaa
agggtacgctctgggatgttatccccttctaagtcgcagcatcgaattgtagcagaagaa
ataagattagaagatctgtctgatgaggatcagtgcggtgaggtgaacatcaagagagat
gaagtcaccgctgctgagctactacacaatccaaatgatttagaagtagacaacaggcct
atcttgacaaatgccaaagttttagcagatgctagtagaattgaaatttccaaaaaatta
aatggcggtacaaaacggaatagaaataggaaaaagattaaaaaagagtctgagaacgat
aatgatatattgatgagacttaaaagggcccggaaggcaacgcctacaattagcgatgag
gtaattgttttagattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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