KEGG   Agathobacter rectalis ATCC 33656: EUBREC_1893
Entry
EUBREC_1893       CDS       T00909                                 
Name
(GenBank) predicted hydrolase of the metallo-beta-lactamase superfamily
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ere  Agathobacter rectalis ATCC 33656
Pathway
ere03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ere00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EUBREC_1893
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ere03019]
    EUBREC_1893
Messenger RNA biogenesis [BR:ere03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EUBREC_1893
SSDB
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Lactamase_B_6 FCSD-flav_bind
Other DBs
NCBI-ProteinID: ACR75637
UniProt: C4ZAY2
Position
complement(1785691..1787364)
AA seq 557 aa
MKKTEKQNTGKLKIIPLGGLEQIGMNITAFEYEDSIIVVDCGLSFPEDDMLGIDLVIPDI
TYLKENIDKVKGFFITHGHEDHIGAIPYVLKEINVPIYATKLTIGIIDRKLEEHGMLKTV
KRKVVKYGQHINLGCFRVEFIKTNHSIQDAAALAIYSPAGIVVHTGDFKVDYTPVFGDAI
DLARFGEIGKKGVLALMCDSTNAERPGFTQSEKSVGKVLDGIFEDHRKNRIIIATFASNV
DRVQQIINCAEKYGRKVAIEGRSMVNIISIASELGYLSLPDNILIDVEQLRSYPDEQTVI
ITTGSQGESMAALSRMANGTHRKVSIKPNDTIVFSSNPIPGNEKSVTGIINELMMKGADV
IFQDVHVSGHACQEDIKLIYSLVNPKYAIPVHGEYKHLVAQAKIAEQLGYDTDHIKILSS
GDVLEINEDGAKVTGRVHVGNVMVDGLGVGDVGNIVLRDRQRLAEDGIIIVVMTLEAGSG
QLLAGPDIVSRGFVYVRNSESLMDEAKCVLDDTMERLTDNNVTDWGKIKTEVKDALGDFV
WKETKRRPMIIPIIMEV
NT seq 1674 nt   +upstreamnt  +downstreamnt
ttgaagaaaacagaaaaacagaatacaggtaagcttaagattattccacttggaggatta
gagcagattggaatgaatattactgcctttgagtatgaggacagtattattgtagtagat
tgcggattatcattccctgaggacgatatgctgggaatagatttggttatccctgatatc
acatatcttaaggagaacatcgataaggtcaagggattctttatcactcatggacatgag
gatcatatcggtgctattccttatgtgcttaaggagataaatgtaccgatatacgctaca
aagcttaccatcggaattattgacagaaagcttgaagagcatggcatgctcaagactgtc
aagagaaaagtcgtaaaatacggacagcatatcaaccttggctgcttcagggttgagttt
ataaagactaaccacagtatccaggatgcggcagcgcttgctatctattcaccggcaggt
atagttgttcatacaggcgatttcaaggtggactatacacctgtatttggagatgcaatc
gaccttgcaaggtttggtgagattggaaagaagggcgtgctcgcgcttatgtgcgacagt
accaatgcagaaagaccgggcttcacacagtctgagaagtctgtcggaaaggtattggac
ggcatctttgaggatcacaggaaaaacagaattatcattgctacatttgcatcaaatgta
gaccgtgtgcagcagattatcaactgtgcggagaagtacggcagaaaggtagccatcgag
ggacgaagcatggtaaatatcatttccatagcctcagagcttggctatctgtcgctgcct
gacaatattcttatagatgtagaacagcttagaagctatcctgatgagcagactgtcatc
atcacgacaggaagccagggagagtcaatggcagctctttcacgtatggcaaacggtacc
cacagaaaggtatccataaagccaaacgataccattgtattcagctcaaaccctataccg
ggaaatgagaagtcggttacaggtatcatcaatgagctcatgatgaagggtgcagatgtt
atattccaggatgtccatgtttccggccatgcgtgtcaggaggatataaagcttatttat
tctcttgtcaatccaaagtacgcaatccctgttcatggagagtacaagcatcttgtggca
caggcaaaaatagccgagcagctcggatatgatacagaccacatcaagatcctttcatca
ggagatgtgcttgaaatcaatgaggacggtgccaaggtgacaggcagagtgcatgtgggc
aatgtcatggtcgatggactcggtgtaggagatgtaggaaatatcgtgctccgtgacaga
cagcgtctggctgaggacggaatcatcatcgttgtgatgacacttgaggcaggctcagga
cagctgcttgcaggtcctgatatagtatcgagaggatttgtatatgtgcgcaattctgag
agcctgatggatgaggcgaaatgcgtgctggatgacacaatggagcgtctgacagacaac
aatgtgacagactggggcaagataaagacagaggtaaaggatgcattgggagactttgtt
tggaaggaaacaaagagaagaccgatgattatacctataattatggaagtgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system