KEGG   Erwinia sp. Ejp617: EJP617_00960
Entry
EJP617_00960      CDS       T01935                                 
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:3.6.4.13]
Organism
erj  Erwinia sp. Ejp617
Brite
KEGG Orthology (KO) [BR:erj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:erj03009]
    EJP617_00960
Ribosome biogenesis [BR:erj03009]
 Prokaryotic type
  rRNA helicases
   EJP617_00960
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_11 AAA_22 CMS1
Other DBs
NCBI-ProteinID: ADP09777
Position
110490..111818
AA seq 442 aa
MTVTTFSELELDESLLQSLQEKGFTRPTAIQAEAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELAKHTHLDIATITGGVAFMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW
RKQTLLFSATLEGEAIQDFAERILNEPVEIEADPARRERKKIQQWYYRADDIKHKTALLL
HLLKQPEVTRAVVFVRKRERVHEVCGWLREAGINNSYLEGELVQAKRNEAIKRVVDGRVN
VLVATDIAARGIDIDDVSHVINFDMPVTSDTYLHRIGRTGRAGKKGIAISLVEAHDNLLL
GKIIRYVKEPIKARVIDELRPTTRAPSEKLKGKPSKKVLAKRTEQKNKQKAEEKPRVKER
HRNRKNIGKRRQPASAKTDPAE
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgactgtaaccactttttccgaacttgaactagacgagagcctgctgcagtccctgcag
gagaaaggcttcacgcgccctacggctatccaggccgaggctatcccgccagcactggag
ggtcgtgacgttctgggttcggcaccaaccggtacaggcaagactgcggcctatctgctg
cccgcactgcaacatttgctcgatttcccgcgtaagaagtcaggcccgccgcgcattctg
atcctgaccccaacccgtgaactggctatgcaggtcgccgaccaggcacgcgagctggca
aaacacacccacctggatattgccaccatcaccggcggcgtggcctttatgaaccacgct
gaggtgttcagcgaaaaccaggatgtggtcgtagccaccaccggacgtctgctgcagtac
atcaaggaagaaaacttcgattgtcgcgccgtcgaaacgctgatcctggatgaagccgac
cggatgctggatatgggctttgctcaggatatcgaaaccatctcggctgaaacccgctgg
cgcaaacagacgctgctgttctccgccacgctggaaggcgaagctatccaggatttcgcc
gagcgtattctcaatgagccggttgaaatagaagccgatccggcgcggcgcgaacgcaaa
aaaatccagcagtggtattaccgtgcggatgacatcaaacacaaaaccgcgctgttactg
catctgctgaaacagccggaagtgacgcgtgcagtggtgtttgtgcgtaagcgtgagcgc
gtgcatgaagtctgtggctggctgcgtgaagcaggcattaacaacagctatctcgaaggg
gaactggtacaggccaaacgtaacgaggcgattaagcgcgtggttgacggccgggtgaac
gtgctggtagccaccgatatcgccgcacgcggcatcgacatcgatgatgtcagccatgtg
attaacttcgatatgccggtcacctccgatacctacctgcaccgcatcggccgcaccggg
cgcgctggtaaaaaaggcatcgccatctcgctggtggaagcgcatgacaatttgctgctg
ggtaaaatcatccgctacgttaaagagccgataaaagcgcgcgtcattgatgaactgcgc
ccgaccacgcgtgcgcccagcgaaaagctgaaaggtaagccatcgaagaaagtgctggct
aaacgcacagaacagaaaaataaacaaaaagcagaagagaaaccacgcgtgaaagagcgc
catcgcaacagaaaaaacattggtaaacgccgtcagcctgccagcgctaaaacggaccca
gctgaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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