KEGG T01935: EJP617

Erwinia sp. Ejp617: EJP617_02580

Entry

EJP617_02580      CDS       T01935

Symbol

pcnB

Name

(GenBank) poly(A) polymerase I

K00970

poly(A) polymerase [EC:2.7.7.19]

Organism

erj Erwinia sp. Ejp617

Pathway

erj03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:erj00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EJP617_02580 (pcnB)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:erj03019]
    EJP617_02580 (pcnB)
Enzymes [BR:erj01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     EJP617_02580 (pcnB)
Messenger RNA biogenesis [BR:erj03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     EJP617_02580 (pcnB)

SSDB

Motif

Pfam:

PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd

Other DBs

NCBI-ProteinID:

ADP09939

Position

285951..287330

AA seq 459 aa
MAPAEIAQVRQMAIVPRDAHNISRKDISENALKVLYRLNKAGYEAYLVGGGVRDLLLGTK
PKDFDVTTNATPDQMRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEAEQQVVEDR
NSSQRDQNGMLLRDNIFGSIEDDAQRRDLTINSLYYNVADFTVRDYVGGLSDLQQGIIRM
IGDPETRYREDPVRMLRVVRFAARLDMSIAAETAEPIPRLATLLHDIPPARLFEETLKLL
QAGYGHSTYLKLLEYQLFQPLFPIITRCFTEQGDSNMERMILLVLKNTDTRIHNQMRVNP
AFLFAAMFWYPQLEMAQKIAQESGLAYYDAFALAMNEVLDETCRSLAVPKRITTLVRDIW
QLQLRLSRRHGKRAWKLMEHPKFRAAYDLLALRAEVENNHELQRLTTWWSEFQVSAPPQQ
KTMMSTLGDDPVPRHRTRRPRKRAPGNARRDSSNSNRQQ

NT seq 1380 nt +upstreamnt +downstreamnt
gtggctcccgctgagatcgcacaggtgcgtcagatggcgatcgtcccacgcgacgcgcat
aacatctcgcgcaaggacatcagtgaaaatgccctcaaggttctgtatcgcctgaataag
gccggatatgaagcctacctggttggcggcggcgtgcgcgatttgctgctgggtacaaag
ccgaaagacttcgatgtgaccaccaatgccacgccggatcagatgcgtaagctgttccgc
aactgccgtctggtcggtcgccgtttccgccttgcccatgtgatgtttggcccggaaatt
atcgaggtcgccaccttccgtggccaccacgaagccgaacagcaggtggttgaagaccgt
aacagctcacagcgtgaccaaaatggcatgctgctgcgcgacaatatttttggctcgatt
gaagatgatgcgcagcgccgcgatctgacgattaacagtctttattacaacgttgccgat
ttcacggtgcgtgattatgtcggtgggctgagcgatttgcagcagggcatcatccgtatg
attggtgacccggaaacccgctaccgtgaagatccggtgcggatgctgcgcgtggtgcgc
tttgccgccaggctggatatgagcatcgccgctgagaccgctgaaccgatcccgcgcctg
gccactctgctgcacgatatccccccggcgcgcctgttcgaagagacgctgaagctgcta
caggccggttatggtcacagcacttatcttaagctgctggaataccagctgttccagccg
ctgttcccgattatcacccgctgcttcaccgaacagggtgacagcaatatggagcggatg
atcctgctggtactgaaaaataccgatacgcgcatccataatcagatgcgcgttaatccg
gccttcctgtttgccgcaatgttctggtatccccagctggaaatggcacagaaaattgct
caggagagcggcctcgcctattacgacgctttcgcgctggcgatgaatgaggtgctggat
gaaacctgccgctcactggctgtccccaaacgtattaccacgctggtgcgcgatatctgg
cagctgcagctgcgcctgtcacgccgccacggtaaacgcgcgtggaagctgatggaacat
cctaagttccgtgccgcctacgatctgctggcgctgcgcgccgaagtggaaaataaccat
gagttgcagcgtctgaccacctggtggagcgagttccaggtttccgcaccgccgcagcag
aagacgatgatgagcaccctcggggacgatccggttccgcgccatcgcacccgccgtcca
cgcaaacgcgcccccggcaacgcacgtcgcgatagcagcaacagcaatcgccagcaatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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