KEGG T04263: AOC36

Erysipelothrix larvae: AOC36_05780

Entry

AOC36_05780       CDS       T04263

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

erl Erysipelothrix larvae

Brite

KEGG Orthology (KO) [BR:erl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:erl03032]
    AOC36_05780
   03400 DNA repair and recombination proteins [BR:erl03400]
    AOC36_05780
Enzymes [BR:erl01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AOC36_05780
DNA replication proteins [BR:erl03032]
Prokaryotic type
  DNA Topoisomerases
   AOC36_05780
DNA repair and recombination proteins [BR:erl03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AOC36_05780

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim DNA_ligase_ZBD DUF1272 RNA_POL_M_15KD Toprim_4 Auto_anti-p27 Lar_restr_allev Zn_Tnp_IS1 Ogr_Delta DZR

Other DBs

NCBI-ProteinID:

AMC93506

UniProt:

A0A0X8GZX7

Position

complement(1252678..1254696)

AA seq 672 aa
MKSLVIVESPSKSKTIEKYLGKDFEVVSSKGHIRDLATRGKGGLGVDVDNDFDPTYVISK
DKKDVVKELKKKAEKVDAVYLATDPDREGEAISWHLADELGLDLNSKNRVVFNEITKEAV
LNAFNQPRTIDMDLVKSQETRRILDRIIGFKLSKLLQSKIKSKSAGRVQSVALKLIVDRE
KEILAFIPEEYWTVEGIFMNQGIEIVTKADKYKGKKLEMKNEADAQKVLDNTTGPFDISK
LIRKDRKKQPKMPFITSTLQQEASTRLNFNSKKTMRVAQKLYEGVDLGGETQGLITYMRT
DSTRLSHVFVDAVKPYIQETFGKEYVGAYRSGKKNDNAQDAHEAIRPTSIHHTPESVKQY
LSNDEYKLYRFIYYRTLASLMSSAVYDSISVTFTQNDYDFNGTGQTLKFDGYLKVYDYEN
STDKLIGDLDETKQYSADKIIPEQHFTQPPARYTEARLIKELEELGIGRPSTYAMIMDTI
VKRAYVTFEAQSETSRTKVFKPTDQGSLTNDKLQDHFSSIINPNYTSNMESDLDKIAEGD
ENNIHTLRSFVDKFYPLLDEANEKMEKIEAEKVGELCPECGGELVYRNGRYGKFIACSNY
PECKYIRPLAGKERPKPEETGEMCPECGSPLVKRKSRFGTFFVGCSAYPKCKYIQPKEKK
ESKKESSDEQES

NT seq 2019 nt +upstreamnt +downstreamnt
atgaaaagtttagtaatcgtggagtcaccatcaaaatcgaaaacgattgaaaaatatctt
gggaaagattttgaggtagtatcttcaaaaggtcatattcgtgacctcgcaacacgtggt
aaaggtggtttaggggttgatgtcgataatgactttgatccaacctatgttatcagtaaa
gataaaaaagatgttgtgaaggaattaaagaaaaaagctgaaaaagttgatgctgtctat
cttgcaaccgacccggatcgtgaaggggaagcaatatcatggcatcttgctgatgagtta
gggcttgatttaaacagcaagaatcgtgtggtgttcaacgaaatcacaaaagaagcggtt
ttaaatgcatttaatcaaccacggaccattgatatggatcttgtgaaatcacaagaaaca
cgccgtatcttagaccgtatcatcgggtttaaattatcaaaattactgcaatcaaaaatt
aagtcaaaaagtgcaggtcgtgttcaatcggtcgcactgaaactcattgtagatcgcgaa
aaagaaatccttgcatttattcctgaagaatactggactgttgaaggtattttcatgaat
caaggcattgagattgttacaaaagcggataaatacaagggtaaaaaactggaaatgaaa
aatgaagcggatgctcaaaaagtccttgataatacaacaggaccttttgatatttcgaaa
cttatacgtaaagatcgtaagaaacaacctaaaatgccatttatcacatcgacattgcaa
caagaagcatcaacacgattgaatttcaattctaaaaagacaatgcgtgttgcgcaaaaa
ctgtatgaaggtgttgatttgggtggcgaaacacaaggtctcattacatacatgagaacg
gactcaacgcgtttaagccatgtgtttgttgatgctgtgaaaccctatattcaagaaaca
tttggaaaagagtatgttggtgcataccgctctggcaagaaaaatgacaatgctcaagat
gcccacgaagcaatacgaccaacaagcattcatcatacgccagaatccgtgaaacaatat
ctatcaaatgatgaatataaactatatcgttttatttactaccgcaccttggcatcctta
atgtcatctgcagtatacgatagtatcagtgtaacctttacacaaaatgattatgatttt
aacggtactggacaaactctaaaatttgatgggtatttgaaagtatatgattatgaaaac
tcaacggataaactcattggtgatttggatgaaacaaaacaatactcagcagataagatt
atccctgaacaacactttacacaacccccagcacgttatactgaagcacgcttaattaaa
gaacttgaagaattaggcattggtcgaccaagtacgtatgcgatgatcatggatacaatt
gtgaaacgtgcttatgttacctttgaagcgcaaagtgaaacaagtcgtactaaagtattt
aaaccaacagatcaagggtcactcaccaacgataagcttcaagatcatttctcatcgatt
ataaatcctaactatacatctaacatggaaagtgatttagacaagattgcggaaggggat
gaaaacaacattcatactctgagatcatttgttgataagttttatccattgcttgatgaa
gcaaatgaaaaaatggaaaagattgaagcagaaaaagtgggtgagctctgtcctgagtgt
ggcggcgaactggtatatcgtaacggtcgatatggcaagtttattgcatgttcaaactac
cctgaatgtaagtatattcgacctcttgcagggaaagaacgtcctaaacccgaagaaaca
ggtgaaatgtgtcctgagtgtgggtcaccacttgtaaaacgtaagagtcgttttggaacc
ttctttgtagggtgttcagcatatccaaaatgtaaatatatccaaccaaaagaaaagaaa
gaaagtaagaaggagtcgagtgatgagcaagaaagttag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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