KEGG   Exiguobacterium sibiricum: Exig_2216
Entry
Exig_2216         CDS       T00687                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
esi  Exiguobacterium sibiricum
Pathway
esi03030  DNA replication
esi03430  Mismatch repair
esi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:esi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Exig_2216
   03430 Mismatch repair
    Exig_2216
   03440 Homologous recombination
    Exig_2216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:esi03032]
    Exig_2216
   03400 DNA repair and recombination proteins [BR:esi03400]
    Exig_2216
Enzymes [BR:esi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Exig_2216
DNA replication proteins [BR:esi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Exig_2216
DNA repair and recombination proteins [BR:esi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Exig_2216
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP tRNA_anti-codon
Other DBs
NCBI-ProteinID: ACB61668
UniProt: B1YKB5
Position
complement(2180679..2183846)
AA seq 1055 aa
MVQLNVRTAYSPLQSTIRMDRYLDEVKRRGFSAAAICETSLTGVPAFMAGCKQRELIPIV
GFEQVIEPDELTILWYAKTSLGLKVLYRLASEMPVEDYSELIAVLEPKRQAPEDEARLRR
LVAQWMGSAHKATILLGVKAVRSTVERDSRERYRQAANALGIETIPIDPVRYLFREEADA
FQALRAIDEGTMFAEQKVSRSAHLKLTEELQDQFTDRELRLLTRWAESQETLTLPFQSRP
LPQVTDDSNHALNRLAHDGLLAHGHVGEEATKRLQYELEVIEKTGFADYFLIVEDLVRHA
KSEGIRVGPGRGSAAGSLVSYALGITTVDPLKYGLLFERFLNPERITMPDIDIDIEDARR
EEVLEYLVERYGKQHVGQIGTLSTLGAKAALRDVARALEFSKDETDAAAKQLGKVTTLQG
LEQQASIYRWFSGSEKRRQLLQLAQAIEGLPRQRSIHAAGVIIGSEELIETTPVDLHASG
RFVTQYLMKAIEQQGLLKIDLLGLRNLTRLRQMEQLIQHAYPDFSVERIPDEDKATLRLF
AKGETDQIFQFESAGMKQTLREVKPNRFEDLVATMSLFRPGPMKFIDLYAKRKAGQPYQM
VHPILEEILTATYGVIVYQEQIMEITRRVAGFTLAQADLLRRAISKKSSQSVEAEKKRFI
EGALQNGFDLTVAETLYDQIERFAGYGFNRSHAVAYTKISYALGYMKAHYPQIFSLVSID
QPERLVRVMREKRLPVLPPDIWMSDFRSTLEGKGIRLGIQTLRGITEKDFHTLREAAKTS
QTITQLLSAVGWGKKERAKIELLLYSGAFDRSTHGDRGLAEQEVLDYFTMASNTLLPDEL
ASLGRRKTTTQTNRTATDWARLERESLGFWLTYSPLMTAMKPPVETTHFQTLSLEGNQTN
YLVCYIEQIREFKTKRAQTMAVIHAVDGYTTEEVVVFPQQYAAFKRSLYIGNVLLIEVKV
QEREGDRQFVLERLRPLGQDVLFVKLPSKNDLAVLERMLESAPGDIPVVVRYADTNETKP
LPGIYAVQQEEELMAQLRIRFGEANIILKNVPRSN
NT seq 3168 nt   +upstreamnt  +downstreamnt
atggtccaactaaatgtccgtacagcatacagtccgttgcaaagtacgattcggatggat
cgttatctcgatgaagtgaagcgacgcggcttttcggctgcggcgatttgtgagacttct
ttgacaggcgtcccggcatttatggcaggctgtaagcaacgggaactgattccgatcgtc
ggattcgaacaagtcatagaaccggatgaacttacgattctatggtatgcgaaaacaagc
cttggattaaaagtactttaccggctggccagtgaaatgccggttgaagattactcggag
ctgattgccgtcctcgaaccgaaacgtcaggcaccggaagatgaagcgcgcttgcggcgt
ctcgtcgcccagtggatgggatcagcacacaaagccacgattttacttggtgtcaaggca
gtccgttcgactgttgaacgcgacagcagggaacgataccgtcaagcggcaaatgccctg
ggaattgaaacgattccgattgatcccgtccgttatctctttcgcgaagaggcagatgcg
tttcaagccctgcgtgccattgacgaaggtacgatgttcgctgaacaaaaggtcagccga
tcggctcatcttaaactgacggaagaattacaggatcagtttacggaccgggaattgcgg
ttgttaacacggtgggcggagtcgcaggagacgctgacgttaccttttcaatcgcgtcct
cttccacaggtgacggatgattcgaatcacgccctgaaccggttggcgcacgatggttta
cttgcacatggacatgtcggggaagaagcgacgaaacggctgcagtatgaactcgaagtt
attgaaaaaacaggatttgcggactattttctgattgttgaagatttggttcgccacgcg
aaaagtgaaggaatccgtgtcggcccgggacgtggatcggctgccggatcactcgtcagt
tatgccctcgggattacgactgtcgatccgctgaagtacggtttgttatttgaacggttc
ctgaatccggaacggatcacgatgcctgatatcgatattgacattgaagatgcgcggcgg
gaggaagtgcttgagtacctggtcgagcggtacggcaagcaacatgtcggtcaaatcgga
acgttatcgactcttggagcgaaagccgccctgcgtgatgtagcacgggcattggaattt
tcgaaagatgaaaccgacgcggcggcaaaacaattgggaaaagtgacgacgctacaaggg
ctcgagcaacaagcatccatttaccgctggttctcgggcagtgaaaaacgacgtcaattg
ttacagctggctcaagcgattgaaggattaccgagacaacgttcgattcatgctgccggc
gtcatcatcggttcagaggaattgatcgagacgacaccggttgatttacatgcaagtgga
cggttcgtcacacaatatttaatgaaggcaatcgaacaacaaggtttgctgaagatcgac
ttgcttggattacgtaatttaacacggttacggcagatggagcagttgattcagcatgcg
taccctgatttctcggtcgaacggataccggacgaggacaaagcgacgttacggttgttt
gccaaaggagagacggatcaaatcttccaatttgaatcggcagggatgaaacagacgctg
cgcgaagtcaagccgaaccggtttgaggatttagtcgcgacgatgtcactgttccgtccg
ggaccgatgaagttcatcgatctctatgcgaaacgaaaagccggtcaaccttatcaaatg
gttcatccgattttagaagaaattttaaccgcgacctacggcgttatcgtctatcaggaa
caaatcatggagattacacgccgggttgccggatttacgctggctcaagccgatttgctg
cggcgggcgatttcgaaaaaaagcagtcagtctgtagaagcggaaaagaaacgttttatc
gaaggggcattgcaaaacggttttgatttaacggttgccgaaacgttgtacgatcaaatc
gaacggtttgccggttatggatttaatcgcagtcatgctgttgcctataccaaaatcagt
tatgcactcggatatatgaaagcccattatccgcaaatcttttcattggtatcgattgat
caaccggaacgtctcgtccgcgtcatgcgggaaaaacggcttccggtattgccgcccgat
atttggatgtcggatttccgttcgacattagaaggcaaaggaatccggctcggaattcag
acgcttcggggaattacggaaaaagactttcatacgttacgtgaagccgcgaaaacctcg
cagacgatcacacagttattgtcggcagtcgggtgggggaaaaaggaacgggcgaagatt
gagctgttgttgtacagcggggcgtttgatcgttcgactcatggagaccgggggcttgca
gaacaggaggtcctcgactactttacgatggcttcgaatacgctgcttccggacgaactc
gcaagccttggacggagaaaaacaacaacacaaacgaaccggacagcaaccgattgggca
cgccttgagcgcgagtcacttggattttggctgacctattctccgttgatgaccgcgatg
aagccgcctgttgagacgacacatttccaaaccctctcgctggaagggaatcaaaccaac
tacttggtttgttatattgagcaaatccgtgaattcaaaacgaagcgtgcccagacaatg
gcagtcattcatgccgtcgacgggtatacgacggaggaagtcgttgtctttccgcaacag
tatgccgcgttcaaacgttcgttgtatatcggaaacgtgctgttgattgaagtgaaggtg
caggaacgtgagggagatcgtcaattcgtcctcgagcggttgcgtcctttggggcaggac
gtcttattcgtcaaactgccgtctaaaaatgatctcgctgttctggaacggatgctcgaa
tcggccccgggtgatattccggtcgtcgtacgttatgccgatacgaatgaaaccaagccg
ttaccgggaatttatgccgttcagcaggaagaggaattgatggcccaactccggattcgc
ttcggggaagcgaatatcatcctgaaaaatgtgccgcgttcgaactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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