KEGG   Sinorhizobium sojae: SJ05684_c11980
Entry
SJ05684_c11980    CDS       T05052                                 
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
esj  Sinorhizobium sojae
Pathway
esj03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:esj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SJ05684_c11980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:esj03021]
    SJ05684_c11980
   03400 DNA repair and recombination proteins [BR:esj03400]
    SJ05684_c11980
Enzymes [BR:esj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SJ05684_c11980
Transcription machinery [BR:esj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SJ05684_c11980
DNA repair and recombination proteins [BR:esj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SJ05684_c11980
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L DUF211
Other DBs
NCBI-ProteinID: ASY62654
UniProt: A0A249PAD1
Position
1159054..1160064
AA seq 336 aa
MIQKNWQELIKPNKVEFTSSGRTKVALVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPNHVICTLDEGAEIRMEFTVNNGKGYVPADRNRSEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMSIETDGSVTGEDAIAFAARILQDQLSVFVNFEEPQKEAEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPSWPPENIEDLAKRYEDQY
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgatccagaaaaattggcaggaattgatcaagccgaacaaggtagagttcacctcttcc
ggccgcaccaaggtggcgttggttgcggaaccgctcgaacgcggcttcggtctgacgctc
ggcaatgcgcttcgccgcgtgcttctttcgtcgctgcgcggtgctgccgtgacggcagtg
cagatcgacggcgtgttgcacgagttctcctcgatcccgggtgtacgggaagatgtgacg
gacatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgacgacgcaaagcgc
atggtcgtgcgcaagcagggtcctggcgttgtaaccgccggtgatatccagacggttggc
gacatcgagatcctcaacccgaaccacgtgatctgcaccctcgacgagggcgcggaaatc
cgcatggaattcaccgtcaacaacggcaaaggctatgtgccggcagaccgcaaccgttcc
gaagacgctccgatcggtctcatcccggtcgacagtctgtattcgccggtcaagaaggtc
tcctacaaggtcgagaacacccgtgaaggccaggtcctcgactacgacaagctgaccatg
tcgatcgagaccgacggctccgtcacgggcgaagacgcgatcgcctttgcggcccgcatt
cttcaggaccagctctcggtcttcgtcaatttcgaagagccgcagaaggaagccgaggaa
gaggccgtcaccgaactcgccttcaacccggcgctgctcaagaaggtcgacgaactggag
ctttccgtccgttcggccaactgcctgaagaacgacaacatcgtctatatcggcgacctc
attcagaagacggaagcagagatgctccgtacgccgaattttggtcgcaagtcgctcaac
gagatcaaggaagttctcgcttccatgggcctgcatctcggcatggaagtgccgtcctgg
ccgccggagaacatcgaagatctcgccaagcgctacgaagaccaatactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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