KEGG   Edwardsiella piscicida C07-087: ETAC_00725
Entry
ETAC_00725        CDS       T02509                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
etc  Edwardsiella piscicida C07-087
Pathway
etc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:etc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ETAC_00725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:etc03021]
    ETAC_00725
   03400 DNA repair and recombination proteins [BR:etc03400]
    ETAC_00725
Enzymes [BR:etc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ETAC_00725
Transcription machinery [BR:etc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ETAC_00725
DNA repair and recombination proteins [BR:etc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ETAC_00725
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2
Other DBs
NCBI-ProteinID: AGH72278
Position
163152..167180
AA seq 1342 aa
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALDFTTEQILDLFFDKVIFEIRDNKLQME
LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDVKLIEVPVEYIVGKVAAKD
YIDESTGELICAANMELSLDLLAKLSQSGYKRIETLFTNDLDHGPYMSETLRVDPTNDRL
SALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAVGRMKFNRSLMRDEIEGSGIL
SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDMLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVRDGIVT
DEIHYLSAIEEGNFVIAQANSNLDEEGRFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTSVAKR
GGMVQYVDASRIVIKVNEDEMFPGEAGIDIYNLTKYTRSNQNTCISQMPCVSLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTSIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNSVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
TEELQILEAGLFARIHDVLVAGGVEAEKLEKLPRDRWLELGLADEAKQNQLEQLAEQYDE
LKAEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQKAYDLGDHTRQQVDLNTFTDEEVLRLAENLKKGLPVATPVFDGAKEREIKGLLE
LGGIPTSGQITLYDGRTGERFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGSHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq 4029 nt   +upstreamnt  +downstreamnt
atggtttactcctataccgagaaaaaacgtattcgtaaggactttggtaagcgtccccaa
gtgctggacgtaccatacctcctttctatccagcttgactcgttccagaagtttatcgag
caagatccggaaggtcagtacggtctggaagcggctttccgttccgtattcccgatccag
agctacagcggcaactccgagctgcagtatgtcagctatcgcctgggtgagccggtattt
gacgtcaaagagtgtcagatccgcggcgtaacctattccgctccgctgcgcgttaagctg
cgtctggtgatctacgagcgtgaggcgccggaaggcaccgttaaagacatcaaagaacaa
gaagtttacatgggtgaaatcccgctgatgaccgaaaacggtactttcgtcatcaacggc
accgagcgtgttatcgtgtctcagctgcaccgcagcccgggcgtattcttcgacagcgac
aagggtaaaacccactcttcaggtaaggtgctgtataacgcacgcatcattccttaccgc
ggttcctggctggactttgagttcgacccgaaagacaacctgtttgtccgtattgaccgc
cgccgtaagctgccggctaccatcatcctgcgcgcgctggatttcaccaccgagcagatc
ctcgatctgttcttcgataaggtgatctttgaaatccgcgacaataagctgcagatggag
ctggtgccggagcgtctgcgcggtgagaccgcctcttttgatatcgaggccaacggtaag
gtctacgttgagaaaggccgccgtattaccgcccgccacatccgtcagctggaaaaagat
gacgttaagctgatcgaagtaccggttgagtacatcgtcggtaaagtggccgccaaagat
tacatcgacgagagcaccggtgagctgatttgcgccgccaacatggagctgtcgttggat
ctgctggccaagctgagccagtctggttacaagcgtatcgaaacgctgttcaccaacgac
ctggatcacggtccgtacatgtccgagaccctgcgcgtcgatccgaccaacgaccgtctg
agcgcgctggtagaaatctaccgcatgatgcgcccgggcgagccgccgacccgcgaagcc
gccgaaaacctgttcgagaacctgttcttctctgaagatcgctacgatctgtctgcggtt
ggccgcatgaagttcaaccgttctctgatgcgtgacgagatcgaaggttccggtatcctg
agcaaagacgacatcatcgaggtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtcgatgatatcgaccacctgggtaaccgtcgcatccgctccgtgggcgagatggcg
gagaaccagttccgcgttggcctggtgcgcgttgagcgtgcggtgaaagagcgtctgtct
ctgggcgatctggatatgctgatgccgcaggacatgatcaacgccaagccgatttcggcg
gcggtgaaagagttcttcggctccagccagctgtcccagtttatggaccagaacaacccg
ctgtctgagatcacccacaagcgtcgtatctctgcgttgggcccgggcggtctgacccgt
gagcgcgccggctttgaagttcgagacgtacacccgacccactatggtcgcgtatgccct
atcgaaacgccggaaggtccgaacatcggtctgatcaactccctgtcagtgtacgcacag
actaacgagtatggtttcctggaaaccccgtaccgccgcgtgcgtgacggtatcgtgacc
gacgaaattcactacctgtctgctattgaagaaggcaacttcgttatcgcccaggcgaac
tccaacctggatgaagaaggccgcttcgtagaagatctggttacctgtcgtagcaagggc
gaatccagcctgttcagccgtgaccaggtcgactacatggacgtttccacccagcaggtg
gtttccgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgccctg
atgggtgcgaacatgcagcgtcaggccgtgccgaccctgcgcgctgacaagccgctggta
ggtaccggtatggagcgcgccgttgcggtggactccggtgtaacctccgtagccaagcgc
ggcggtatggtgcagtacgtggatgcatcccgtatcgtcatcaaggttaatgaagatgag
atgttcccgggcgaagccggcatcgatatctacaacctgaccaaatacacccgttccaac
cagaacacctgcatcagccagatgccgtgtgtttctctgggtgagccgattgagcgcggc
gacgtgctggccgacggcccgtccaccgatctgggtgagctggcgctgggtcagaacatg
cgcgtcgcgttcatgccgtggaacggctacaacttcgaagactccatcttggtctccgag
cgcgtggtacaggaagatcgcttcacctctatccatatccaggagctggcctgtgtgtct
cgtgacaccaagctggggccggaagagatcactgccgacatcccgaacgtcggtgaagca
gcgctctccaagctcgacgaatccggtatcgtgtatatcggcgccgaagtgaagggtggc
gacattctggtcggtaaggtaacgccgaagggcgaaacccagctgacgccggaagagaag
ctgctgcgcgcgatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgta
ccgaacagcgtttccggtaccgttatcgacgttcaggtctttacccgcgatggcgtggaa
aaagacaagcgtgcgctggaaatcgaagagatgcagctgaagcaggccaaaaaagacctg
actgaagagctgcagatcctggaagccggtctgtttgcccgtattcacgatgtgctggtt
gccggcggcgtggaagcggagaagctggaaaaactgccgcgtgaccgttggcttgagctg
ggcctggccgatgaagccaagcagaatcagctggagcagctggctgagcagtatgacgag
ctgaaggccgagttcgagaagaagctggaagcgaaacgccgtaagatcacccagggcgac
gatctggcgccgggcgtgctgaagatcgttaaggtgtacctggcggtgaaacgtcagatc
cagccgggcgataagatggcaggtcgtcacggtaacaagggtgttatctctaagatcaac
ccgatcgaagatatgccttacgatgagaacgggactccggtcgacatcgtactgaacccg
ctgggcgtaccgtcgcgtatgaacatcggtcagatcctggaaacccatctgggtatggcg
gcgaaaggtatcggcgataagatcaacgccatgcttaagcagcagcaggaagtggccaag
ctgcgtgagtttatccagaaagcctacgatctgggtgatcacacccgtcagcaggtggat
ctgaacaccttcaccgacgaagaagtcctgcgtctggccgaaaacctgaagaaaggtctg
ccggttgcaacgccggtgttcgacggtgctaaagagcgcgaaatcaagggcctgctggag
ctgggtggtatcccgacctccggtcagatcaccctgtatgatggtcgtaccggtgagcgt
ttcgagcgtcaggtaaccgtgggttacatgtacatgctgaagctgaaccacttggtcgac
gacaagatgcatgcgcgttccaccggctcctacagcctggttacccagcagccgctgggt
ggtaaggcgcagttcggtggtcagcgcttcggggagatggaagtgtgggcgctggaagcc
tacggcgccgcctacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaacggc
cgtaccaagatgtataagaacatcgtggatggcagccatcagatggaaccaggcatgccg
gaatccttcaacgtactgttgaaagaaatccgctcgctgggcatcaacatcgagctggaa
gacgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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