KEGG   Edwardsiella piscicida C07-087: ETAC_13880
Entry
ETAC_13880        CDS       T02509                                 
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
etc  Edwardsiella piscicida C07-087
Pathway
etc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:etc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ETAC_13880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:etc03019]
    ETAC_13880
Messenger RNA biogenesis [BR:etc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     ETAC_13880
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: AGH74897
Position
complement(3127246..3127779)
AA seq 177 aa
MIDDDGYRPNVGIVICNRQGQVLWARRYGQNSWQFPQGGINAGETAEQAMFRELFEEVGL
GRKDVKILASTRNWLRYKLPKRLVRWDTKPVCIGQKQRWFLLQLLCSEAEINMQRSNTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFSSVVMSLQESVAQGGRSSPGYRRKRG
NT seq 534 nt   +upstreamnt  +downstreamnt
gtgatcgatgatgatggctaccgcccgaacgtaggtattgtaatctgtaaccggcagggg
caggtgctgtgggcacgtcgctatgggcaaaactcctggcagttcccgcagggcgggatc
aacgccggggagaccgccgagcaggcgatgttccgcgaactgtttgaagaggtggggctg
ggacgtaaggatgtgaaaattctggcctctacccgtaactggttacgctataaattacct
aaacgtttggtgcgttgggatacgaagccggtgtgtatcggccaaaagcagcgctggttt
ttactgcagctgctgtgcagtgaggcggagatcaatatgcagcgcagcaatacgccggag
tttgatggttggcgctgggtcagctattggtatccggtgcgtcaggtagtgtcgtttaag
cgcgatgtttaccgccgggtgatgaaggagttctcatccgttgtcatgtcattgcaggag
agcgtggcccagggggggcgttcgtctcccggctatcgccgtaaaagaggttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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