KEGG   Edwardsiella tarda FL6-60: ETAF_0042Help
Entry
ETAF_0042         CDS       T02091                                 

Definition
Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
etd  Edwardsiella tarda FL6-60
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:etd00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    ETAF_0042
Enzymes [BR:etd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     ETAF_0042
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     ETAF_0042
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
40941..41750
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGIAPFLEGKTLSHLTVRQPRLRWPVSETLLTLRDRPILSVQRRAKYLL
LALPEGWIVIHLGMSGSVRILPAQTPPQKHDHVDLLLTDGMMLRYTDPRRFGAWLWYDDL
ATASVLAHLGPEPLSEAFSAEYLLERARGRRTAVKPWLMDNTLVVGVGNIYASESLFSAQ
IHPDRLAGSLSADEASLLVQTIKAVLQRSIDQGGTTLRDFLQADGKPGYFAQQLQVYGRA
GEACLTCGTTIKSSKHGQRTTFYCPHCQR
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccggaagtagaaaccagccggcgcggtattgcgccgtttttggagggg
aaaacgctctcccatctgacggtgcgccagccgcgcctgcgctggccggtttccgaaacg
ctgctgacgctgcgcgatcggccgatactgagcgtgcagcggcgtgccaagtatctgctg
ctggcgttgcctgaggggtggatcgtcatccatcttggcatgtcgggtagcgtcaggatc
ctgccggcacagacgccgccgcagaagcacgatcacgtcgatctgctgctgacggatggc
atgatgctgcgctataccgatccgcgccgctttggcgcttggctgtggtatgacgatctg
gcgacggccagcgtactggcgcatctggggccggagccgctcagcgaggcgttcagcgca
gagtacctgctggagagggcgcgcggtcggcgtacggcggtgaagccgtggctgatggat
aacacgctggtggtcggcgtcggtaacatctatgccagcgagtcgctgttcagtgcacag
atccatccggatcgtctggcgggatcgctgagcgcagatgaagcgagcctgctggtgcag
acgatcaaggcggtgctgcagcgatccatcgatcaaggcgggacgacgctgcgcgatttt
ttacaggcggacggtaagccgggctactttgcgcagcagctacaggtctacgggcgggcg
ggggaggcgtgtctgacctgcggcacgaccatcaagagtagcaagcatgggcagcgcacc
acgttttactgcccacactgccagcgttaa

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