KEGG   Escherichia coli O157 H7 TW14359 (EHEC): ECSP_3451
Entry
ECSP_3451         CDS       T00949                                 
Symbol
der
Name
(GenBank) 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits
  KO
K03977  GTPase
Organism
etw  Escherichia coli O157:H7 TW14359 (EHEC)
Brite
KEGG Orthology (KO) [BR:etw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:etw03009]
    ECSP_3451 (der)
Ribosome biogenesis [BR:etw03009]
 Prokaryotic type
  GTPases
   ECSP_3451 (der)
SSDB
Motif
Pfam: MMR_HSR1 FeoB_N KH_dom-like GTP_EFTU Dynamin_N AIG1 RsgA_GTPase cobW Roc Ras AAA_22 TniB AAA_24 NTPase_1 Nuc_deoxyri_tr2 SRPRB
Other DBs
NCBI-ProteinID: ACT73218
Position
complement(3411013..3412485)
AA seq 490 aa
MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI
DGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKT
DGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAPQEEVDEDAEYWA
QFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDS
IYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISD
QDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSG
VGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPIV
VIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRIQFKEGENPYANKRNTLTPTQMRKRK
RLMKHIKKNK
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggtacctgtggtcgcgcttgtcgggcgccctaacgtaggaaaatccacgttatttaac
cgtctaactcgcacccgagatgcgctggttgcggatttcccgggtctgactcgtgaccgt
aagtacggtcgtgcggaaattgaaggccgtgagtttatctgtattgataccggcgggatt
gatggcacagaagacggtgtagaaacccgcatggcggaacagtcgctgctggcgattgaa
gaagcggacgtcgtactgtttatggtggatgcgcgcgcgggcctgatgccggcagatgaa
gcgattgccaaacatctgcgctcccgtgaaaaaccgaccttcctggtggcaaacaaaact
gacggtctggatcccgatcaggcagtggttgatttctactcgcttggtttaggtgaaatc
tacccgatcgccgcgtctcacggtcgtggcgtattaagtctgctggagcatgtgctactg
ccgtggatggaagatctcgcaccgcaagaggaagtcgacgaagacgctgaatactgggcg
caatttgaagcggaagagaacggcgaagaagaagaggaagacgacttcgacccgcaaagt
ctgccgatcaaactggcgattgtgggtcgtccgaacgtaggtaagtctacactcactaac
cgtattcttggtgaagagcgcgttgttgtttatgacatgcctggtacgacgcgtgacagt
atctacattccaatggaacgcgatggacgtgagtatgtgctcattgacaccgctggcgta
cgtaaacgcggcaaaatcaccgatgctgtagagaaattctccgtaatcaaaacgttgcag
gccattgaagacgccaacgtggtgatgttagtgattgatgcgcgcgaaggtatttccgat
caggatctctcgctgctgggctttattctcaatagtgggcgctcacttgtcattgtggtg
aataagtgggatggcctgagtcaggaagtgaaagagcaggtgaaagaaacgctggacttc
cgtctgggctttatcgattttgctcgtgtgcactttatctctgccttgcacggcagtggt
gttggtaacttgtttgaatcagtacgtgaagcgtatgacagctccacccgtcgtgtgggg
acctctatgctgacgcgcatcatgacgatggctgttgaagatcaccaaccgccgctggta
cgcggtcgtcgtgtgaagctgaaatatgcacacgccggtggttataatccgccgattgtg
gtgattcacggtaatcaggtgaaagacctgcctgattcctacaagcgttacttgatgaac
tacttccgcaaatcgctggacgtaatgggatcgccgattcgtattcagttcaaagaaggg
gaaaacccgtatgcgaacaagcgtaacaccctgacgccaacccagatgcgtaaacgtaag
cgtctgatgaagcacatcaagaaaaataaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (22)   

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