KEGG   Escherichia coli UMNK88: UMNK88_5289Help
Entry
UMNK88_5289       CDS       T02001                                 

Gene name
holD
Definition
DNA polymerase III, psi subunit HolD
Orthology
K02344  
DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
eun  Escherichia coli UMNK88
Pathway
Purine metabolism
Pyrimidine metabolism
Metabolic pathways
DNA replication
Mismatch repair
Homologous recombination
Module
DNA polymerase III complex, bacteria
Brite
KEGG Orthology (KO) [BR:eun00001]
 Metabolism
  Nucleotide metabolism
   00230 Purine metabolism
    UMNK88_5289 (holD)
   00240 Pyrimidine metabolism
    UMNK88_5289 (holD)
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    UMNK88_5289 (holD)
   03430 Mismatch repair
    UMNK88_5289 (holD)
   03440 Homologous recombination
    UMNK88_5289 (holD)
Enzymes [BR:eun01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     UMNK88_5289 (holD)
DNA replication proteins [BR:eun03032]
 Prokaryotic Type
  DNA Replication Elongation factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     UMNK88_5289 (holD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Structure
PDB: 

Jmol
Position
5153768..5154181
Genome map
AA seq 137 aa AA seqDB search
MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRA
LTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQVASPALTELRANPTARAA
LWQQICTYEHDFFPRND
NT seq 414 nt NT seq  +upstreamnt  +downstreamnt
atgacatcccgacgagactggcagttacagcaactgggcattacccagtggtcgctgcgt
cgccctggcgcgttgcagggggagattgccattgcgatcccggcacacgtccgtctggtg
atggtggcaaacgatcttcccgccctgactgatcctttagtgagcgatgttctgcgcgca
ttaaccgtcagccccgatcaagtgctgcaactgacgccagaaaaaatcgcgatgctgccg
caaggcagtcgctgcaacagctggcggttgggtactgacgaaccgctatcactggaaggc
gctcaggtggcatcaccggcgctcaccgaattacgggcaaacccaacggcacgcgccgcg
ttatggcaacaaatttgcacatatgaacacgatttcttccctcgaaacgactga

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