KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10005306mg
Entry
EUTSA_v10005306mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10005306mg
   03009 Ribosome biogenesis [BR:eus03009]
    EUTSA_v10005306mg
Enzymes [BR:eus01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EUTSA_v10005306mg
Spliceosome [BR:eus03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    EUTSA_v10005306mg
Ribosome biogenesis [BR:eus03009]
 Eukaryotic type
  90S particles
   Helicases
    EUTSA_v10005306mg
  Pre-60S particles
    EUTSA_v10005306mg
SSDB
Motif
Pfam: DEAD Helicase_C
Other DBs
NCBI-GeneID: 18011677
NCBI-ProteinID: XP_006395181
UniProt: V4KR35
Position
Unknown
AA seq 280 aa
MSFLEQRHSTSYCAHLTYPGKTLAFLISAAELLYHVRFTPRNGTGVIVICPTRELAIQSY
GVAKELLYHSQTVGKVIGGENRKKEAEILVKGVNLLVATPGRLLDHLENTNGFVFKNLKF
LVMDEADRILEQNFEEDMKMIIKLLPKTRQTLLFTATQTSKVEDLARVSLSSPVYIVVDE
GRKEVRNEDLEQSYFVVPSAKRLVFLLIFLKRFHGKKKIMVFFSTCKSSKFHAELFRYIK
IDCLEIRRGIDQSKKTSTFFQFIKVETGVLLCTNVAARGL
NT seq 840 nt   +upstreamnt  +downstreamnt
atgtcttttctagagcaaagacattcaacctcttattgtgcccacttgacctatcctgga
aaaaccttagcttttctaatatcggctgcagagcttctctaccatgtccggtttactcct
cgcaacggaaccggtgttatcgttatttgcccaacaagagagctagccattcagtcatat
ggagtggcgaaagaacttctatatcattcgcagactgtgggaaaggttattggcggcgag
aacagaaagaaagaagctgaaattcttgtgaaaggtgttaatttgttagtagcaacccct
ggaagacttctcgaccaccttgaaaatacaaatggatttgtgttcaagaacttgaagttt
cttgtgatggatgaggctgataggatactggaacaaaacttcgaagaagacatgaagatg
atcattaagctgctaccaaagacaaggcagacgttgttgtttaccgccacacagacttcc
aaggttgaggatcttgctcgggtgtcactttcgtcacctgtttatattgttgtcgatgaa
ggacgaaaagaggttagaaatgaagacttggagcaaagttatttcgttgtgccaagtgcg
aagcgtttagttttcttacttatcttcttgaagagatttcacgggaaaaagaaaatcatg
gtgtttttctcgacgtgcaaatccagcaagtttcacgccgaactctttcgatacatcaaa
atagattgccttgaaattcgaagagggatagatcagagcaaaaagacttcaacatttttc
cagttcataaaggttgaaactggtgtcttgttgtgtactaatgtcgctgcccgtggttta

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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